Complete genome sequence of Desulfotomaculum acetoxidans type strain (5575T)

被引：31

作者：

Spring, Stefan ^{[1
]}

Lapidus, Alla ^{[2
]}

Schroeder, Maren ^{[1
]}

Gleim, Dorothea ^{[1
]}

Sims, David ^{[3
]}

Meincke, Linda ^{[3
]}

Del Rio, Tijana Glavina ^{[2
]}

Tice, Hope ^{[2
]}

Copeland, Alex ^{[2
]}

Cheng, Jan-Fang ^{[2
]}

Lucas, Susan ^{[2
]}

Chen, Feng ^{[2
]}

Nolan, Matt ^{[2
]}

Bruce, David ^{[2
,3
]}

Goodwin, Lynne ^{[2
,3
]}

Pitluck, Sam ^{[2
]}

Ivanova, Natalia ^{[2
]}

Mavromatis, Konstantinos ^{[2
]}

Mikhailova, Natalia ^{[2
]}

Pati, Amrita ^{[2
]}

Chen, Amy ^{[4
]}

Palaniappan, Krishna ^{[4
]}

Land, Miriam ^{[2
,5
]}

Hauser, Loren ^{[2
,5
]}

Chang, Yun-Juan ^{[2
,5
]}

Jeffries, Cynthia D. ^{[2
,5
]}

Chain, Patrick ^{[2
,6
]}

Saunders, Elizabeth ^{[2
,3
]}

Brettin, Thomas ^{[2
,3
]}

Detter, John C. ^{[2
,3
]}

Goeker, Markus ^{[1
]}

Bristow, Jim ^{[2
]}

Eisen, Jonathan A. ^{[2
,7
]}

Markowitz, Victor ^{[4
]}

Hugenholtz, Philip ^{[2
]}

Kyrpides, Nikos C. ^{[2
]}

Klenk, Hans-Peter ^{[1
]}

Han, Cliff ^{[2
,3
]}

机构：

[1] DSMZ German Collect Microorganisms & Cell Culture, Braunschweig, Germany

[2] US DOE, Joint Genome Inst, Walnut Creek, CA USA

[3] Los Alamos Natl Lab, Biosci Div, Los Alamos, NM USA

[4] Univ Calif Berkeley, Lawrence Berkeley Lab, Biol Data Management & Technol Ctr, Berkeley, CA 94720 USA

[5] Oak Ridge Natl Lab, Oak Ridge, TN USA

[6] Lawrence Livermore Natl Lab, Livermore, CA USA

[7] Univ Calif Davis, Genome Ctr, Davis, CA 95616 USA

来源：

STANDARDS IN GENOMIC SCIENCES | 2009年 / 1卷 / 03期

关键词：

sulfate-reducer; hydrogen sulfide; piggery waste; mesophile; motile; sporulating; obligate anaerobic; Peptococcaceae; Clostridiales; Firmicutes;

D O I：

10.4056/sigs.39508

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

Desulfotomaculum acetoxidans Widdel and Pfennig 1977 was one of the first sulfate-reducing bacteria known to grow with acetate as sole energy and carbon source. It is able to oxidize substrates completely to carbon dioxide with sulfate as the electron acceptor, which is reduced to hydrogen sulfide. All available data about this species are based on strain 5575(T), isolated from piggery waste in Germany. Here we describe the features of this organism, together with the complete genome sequence and annotation. This is the first completed genome sequence of a Desulfotomaculum species with validly published name. The 4,545,624 bp long single replicon genome with its 4370 protein-coding and 100 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

引用

页码：242 / 252

页数：11

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