MAGIC: access portal to a cross-platform gene expression compendium for maize

被引：2

作者：

Fu, Qiang ^{[1
]}

Fierro, Ana Carolina ^{[1
,2
,3
]}

Meysman, Pieter ^{[1
]}

Sanchez-Rodriguez, Aminael ^{[1
,2
,3
]}

Vandepoele, Klaas ^{[3
,4
]}

Marchal, Kathleen ^{[1
,2
,3
]}

Engelen, Kristof ^{[1
,5
]}

机构：

[1] Katholieke Univ Leuven, Ctr Microbial & Plant Genet, B-3001 Leuven, Belgium

[2] Ghent Univ iMinds, Dept Informat Technol, B-9050 Ghent, Belgium

[3] Univ Ghent, Dept Plant Biotechnol & Bioinformat, B-9052 Ghent, Belgium

[4] Univ Ghent, VIB, Dept Plant Syst Biol, B-9052 Ghent, Belgium

[5] Fdn Edmund Mach, Res & Innovat Ctr, I-38010 Trento, Italy

来源：

BIOINFORMATICS | 2014年 / 30卷 / 09期

关键词：

DATABASE;

D O I：

10.1093/bioinformatics/btt739

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

To facilitate the exploration of publicly available Zea mays expression data, we constructed a maize expression compendium, making use of an integration methodology and a consistent probe to gene mapping based on the 5b.60 sequence release of Z. mays. The compendium is made available through a web portal MAGIC that hosts a variety of analysis tools to easily browse and analyze the data. Our compendium is different from previous initiatives in combining expression values across different experiments by providing a consistent gene annotation across different platforms.

引用

页码：1316 / 1318

页数：3

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