Do Spatial Designs Outperform Classic Experimental Designs?

被引:18
|
作者
Hoefler, Raegan [1 ]
Gonzalez-Barrios, Pablo [1 ,2 ]
Bhatta, Madhav [1 ]
Nunes, Jose A. R. [1 ,3 ]
Berro, Ines [1 ,2 ]
Nalin, Rafael S. [4 ]
Borges, Alejandra [2 ]
Covarrubias, Eduardo [5 ,6 ]
Diaz-Garcia, Luis [7 ]
Quincke, Martin [8 ]
Gutierrez, Lucia [1 ,2 ]
机构
[1] Univ Wisconsin, Dept Agron, 1575 Linden Dr, Madison, WI 53706 USA
[2] Univ Republica, Stat Dept, Fac Agron, Garzon 780, Montevideo, Uruguay
[3] Univ Fed Lavras, Dept Biol, Lavras, MG, Brazil
[4] Univ Sao Paulo, Dept Genet, Escola Super Agr Luiz de Queiroz, BR-13141890 Piracicaba, SP, Brazil
[5] CGIAR Excellence Breeding Platform EiB, El Batan, Mexico
[6] Int Maize & Wheat Improvement Ctr CIMMYT, El Batan, Mexico
[7] Inst Nacl Invest Forestales Agr & Pecuarias, Aguascalientes 20676, Aguascalientes, Mexico
[8] Inst Nacl Invest Agr, Programa Nacl Invest Cultivos Secano, Est Exp La Estanzuela 70000, Colonia, Uruguay
关键词
Experimental design; Autoregressive process; Prediction accuracy; Response to selection; Spatial correction; Randomization-based experimental designs; X ENVIRONMENT INTERACTION; INCOMPLETE BLOCK-DESIGNS; GENOMIC SELECTION; FIELD EXPERIMENTS; UNBALANCED DATA; YIELD TRIALS; MIXED MODELS; VARIETY; HERITABILITY; CONSTRUCTION;
D O I
10.1007/s13253-020-00406-2
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Controlling spatial variation in agricultural field trials is the most important step to compare treatments efficiently and accurately. Spatial variability can be controlled at the experimental design level with the assignment of treatments to experimental units and at the modeling level with the use of spatial corrections and other modeling strategies. The goal of this study was to compare the efficiency of methods used to control spatial variation in a wide range of scenarios using a simulation approach based on real wheat data. Specifically, classic and spatial experimental designs with and without a two-dimensional autoregressive spatial correction were evaluated in scenarios that include differing experimental unit sizes, experiment sizes, relationships among genotypes, genotype by environment interaction levels, and trait heritabilities. Fully replicated designs outperformed partially and unreplicated designs in terms of accuracy; the alpha-lattice incomplete block design was best in all scenarios of the medium-sized experiments. However, in terms of response to selection, partially replicated experiments that evaluate large population sizes were superior in most scenarios. The AR1 x AR1 spatial correction had little benefit in most scenarios except for the medium-sized experiments with the largest experimental unit size and low GE. Overall, the results from this study provide a guide to researchers designing and analyzing large field experiments. Supplementary materials accompanying this paper appear online.
引用
收藏
页码:523 / 552
页数:30
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