imDEV: a graphical user interface to R multivariate analysis tools in Microsoft Excel

被引:31
|
作者
Grapov, Dmitry [1 ,2 ]
Newman, John W. [1 ,2 ]
机构
[1] Univ Calif Davis, Dept Nutr, Davis, CA 95616 USA
[2] ARS, Obes & Metab Res Unit, USDA, Western Human Nutr Res Ctr, Davis, CA 95616 USA
关键词
D O I
10.1093/bioinformatics/bts439
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Summary: Interactive modules for Data Exploration and Visualization (imDEV) is a Microsoft Excel spreadsheet embedded application providing an integrated environment for the analysis of omics data through a user-friendly interface. Individual modules enables interactive and dynamic analyses of large data by interfacing R's multivariate statistics and highly customizable visualizations with the spreadsheet environment, aiding robust inferences and generating information-rich data visualizations. This tool provides access to multiple comparisons with false discovery correction, hierarchical clustering, principal and independent component analyses, partial least squares regression and discriminant analysis, through an intuitive interface for creating high-quality two- and a three-dimensional visualizations including scatter plot matrices, distribution plots, dendrograms, heat maps, biplots, trellis biplots and correlation networks.
引用
收藏
页码:2288 / 2290
页数:3
相关论文
共 50 条
  • [1] Graphical user interface tools
    Cosmo, G
    [J]. HEPVIS96 WORKSHOP ON VISUALIZATION IN HIGH-ENERGY PHYSICS, 1997, 97 (01): : 111 - 116
  • [2] THE USE OF MICROSOFT EXCEL AS A USER-INTERFACE FOR BIOLOGICAL SIMULATIONS
    TACK, G
    ROSELLI, RJ
    OVERHOLSER, KA
    HARRIS, TR
    [J]. COMPUTERS AND BIOMEDICAL RESEARCH, 1995, 28 (01): : 24 - 37
  • [3] Development of an integrated chassis design analysis tool using Excel graphical user interface
    Kim, Young Deuk
    Jung, Hong Kyu
    Kang, Moon Won
    Cho, Hyeon Seok
    Kim, Sang Sup
    [J]. 8TH INTERNATIONAL MUNICH CHASSIS SYMPOSIUM 2017: CHASSIS.TECH PLUS, 2017, : 411 - 425
  • [4] Automated analyses for single-fiber electrophysiological recordings using a newly developed Microsoft Excel application and graphical user interface
    Grayson, Max
    Nagle-Pinkham, Daniel
    Gokhman, Dmitry
    Ruparel, Shivani
    [J]. JOURNAL OF NEUROSCIENCE METHODS, 2021, 362
  • [5] MVPANI: A Toolkit With Friendly Graphical User Interface for Multivariate Pattern Analysis of Neuroimaging Data
    Peng, Yanmin
    Zhang, Xi
    Li, Yifan
    Su, Qian
    Wang, Sijia
    Liu, Feng
    Yu, Chunshui
    Liang, Meng
    [J]. FRONTIERS IN NEUROSCIENCE, 2020, 14
  • [6] HYPER-Tools. A graphical user-friendly interface for hyperspectral image analysis
    Mobaraki, Nabiollah
    Amigo, Jose Manuel
    [J]. CHEMOMETRICS AND INTELLIGENT LABORATORY SYSTEMS, 2018, 172 : 174 - 187
  • [7] Abandoning Proprietary Test Tools for Graphical User Interface Verification
    Kreeger, Matthew Nicolas
    Lativy, Nicholas
    [J]. TACI PART 2008:TESTING: ACADEMIC AND INDUSTRIAL CONFERENCE PRACTICE AND RESEARCH TECHNIQUES, PROCEEDINGS, 2008, : 52 - 56
  • [8] mcaGUI: microbial community analysis R-Graphical User Interface (GUI)
    Copeland, Wade K.
    Krishnan, Vandhana
    Beck, Daniel
    Settles, Matt
    Foster, James A.
    Cho, Kyu-Chul
    Day, Mitch
    Hickey, Roxana
    Schuette, Ursel M. E.
    Zhou, Xia
    Williams, Christopher J.
    Forney, Larry J.
    Abdo, Zaid
    [J]. BIOINFORMATICS, 2012, 28 (16) : 2198 - 2199
  • [9] The R commander: A basic-statistics graphical user interface to R
    Fox, J
    [J]. JOURNAL OF STATISTICAL SOFTWARE, 2005, 14 (09):
  • [10] A graphical user interface for infant ERP analysis
    Jussi Kaatiala
    Santeri Yrttiaho
    Linda Forssman
    Katherine Perdue
    Jukka Leppänen
    [J]. Behavior Research Methods, 2014, 46 : 745 - 757