Genome-wide SNP-based linkage scan identifies a locus on 8q24 for an age-related hearing impairment trait

被引:42
|
作者
Huyghe, Jeroen R. [1 ]
Van Laer, Lut [1 ]
Hendrickx, Jan-Jaap [2 ,3 ]
Fransen, Erik [1 ]
Demeester, Kelly [2 ]
Topsakal, Vedat [2 ]
Kunst, Sylvia [3 ]
Manninen, Minna [4 ]
Jensen, Mona [5 ]
Bonaconsa, Amanda [6 ]
Mazzoli, Manuela [6 ]
Baur, Manuela [7 ]
Hannula, Samuli [8 ]
Maki-Torkko, Elina [8 ]
Espeso, Angeles [9 ]
Van Eyken, Els [1 ]
Flaquer, Antonia [10 ]
Becker, Christian [11 ,12 ]
Stephens, Dafydd [9 ]
Sorri, Martti [8 ]
Orzan, Eva [6 ]
Bille, Michael [5 ]
Parving, Agnete [5 ]
Pyykko, Ilmari [4 ]
Cremers, Cor W. R. J. [3 ]
Kremer, Hannie [3 ,14 ]
Van de Heyning, Paul H. [2 ]
Wienker, Thomas E. [10 ]
Nuernberg, Peter [11 ,12 ,13 ]
Pfister, Markus [7 ]
Van Camp, Guy [1 ]
机构
[1] Univ Antwerp, Dept Med Genet, B-2610 Antwerp, Belgium
[2] Univ Antwerp Hosp, Dept Otorhinolaryngol, B-2650 Antwerp, Belgium
[3] Radboud Univ Nijmegen, Med Ctr, Dept Otorhinolaryngol, NL-6500 HB Nijmegen, Netherlands
[4] Univ Tampere, Dept Otorhinolaryngol, FIN-33014 Tampere, Finland
[5] Bispebjerg Hosp, Dept Audiol, DK-2400 Copenhagen, Denmark
[6] Univ Hosp Padova, Dept Otosurg, I-35128 Padua, Italy
[7] Univ Tubingen, Dept Otorhinolaryngol, D-72074 Tubingen, Germany
[8] Univ Oulu, Dept Otorhinolaryngol, FIN-90220 Oulu, Finland
[9] Cardiff Univ, Welsh Hearing Inst, Cardiff CF4 4XW, S Glam, Wales
[10] Univ Bonn, Inst Med Biometry Informat & Epidemiol, D-53105 Bonn, Germany
[11] Univ Cologne, CCG, D-50674 Cologne, Germany
[12] Univ Cologne, Inst Genet, D-50674 Cologne, Germany
[13] Univ Cologne, Cologne Excellence Cluster Cellular Stress Respon, CECAD, D-50674 Cologne, Germany
[14] Nijmegen Ctr Mol Life Sci, NL-6500 HB Nijmegen, Netherlands
基金
英国医学研究理事会;
关键词
D O I
10.1016/j.ajhg.2008.08.002
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Age-related hearing impairment (ARHI), or presbycusis, is a very common multifactorial disorder. Despite the knowledge that genetics play an important role in the etiology of human ARHI as revealed by heritability studies, to date, its precise genetic determinants remain elusive. Here we report the results of a cross-sectional family-based genetic study employing audiometric data. By using principal component analysis, we were able to reduce the dimensionality of this multivariate phenotype while capturing most of the variation and retaining biologically important features of the audiograms. We conducted a genome-wide association as well as a linkage scan with high-density SNP microarrays. Because of the presence of genetic population substructure, association testing was stratified after which evidence was combined by meta-analysis. No association signals reaching genome-wide significance were detected. Linkage analysis identified a linkage peak on 8q24.13-q24.22 for a trait correlated to audiogram shape. The signal reached genome-wide significance, as assessed by simulations. This finding represents the first locus for an ARHI trait.
引用
收藏
页码:401 / 407
页数:7
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