Spirosoma terrae sp nov., Isolated from Soil from Jeju Island, Korea

被引:10
|
作者
Ten, Leonid N. [1 ]
Okiria, Joseph [1 ]
Lee, Jae-Jin [1 ]
Lee, Seung-Yeol [1 ]
Park, Sangkyu [1 ]
Lee, Dae Sung [2 ]
Kang, In-Kyu [3 ]
Kim, Myung Kyum [4 ]
Jung, Hee-Young [1 ,5 ]
机构
[1] Kyungpook Natl Univ, Sch Appl Biosci, Daegu 41566, South Korea
[2] Kyungpook Natl Univ, Dept Environm Engn, Daegu 41566, South Korea
[3] Kyungpook Natl Univ, Dept Hort Sci, Daegu 41566, South Korea
[4] Seoul Womens Univ, Dept Bio & Environm Technol, Seoul 01797, South Korea
[5] Kyungpook Natl Univ, Inst Plant Med, Daegu 41566, South Korea
基金
新加坡国家研究基金会;
关键词
PERFORMANCE LIQUID-CHROMATOGRAPHY; COMPLETE GENOME SEQUENCE; BACTERIAL SYSTEMATICS; EMENDED DESCRIPTION; GENUS SPIROSOMA; HAN RIVER; RESISTANT; GAMMA; TREES; WATER;
D O I
10.1007/s00284-017-1408-6
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
The taxonomic position of bacterial strain, designated 15J9-4(T), recovered from a beach soil sample on Jeju Island, South Korea, was established using a polyphasic approach. Strain 15J9-4(T) was assigned to phylum Bacteroidetes within the family Cytophagaceae based on 16S rRNA gene similarities. The closest phylogenetic relatives with validly published names were Spirosoma panaciterrae Gsoil 1519(T) (94.2% similarity) and Spirosoma luteolum 16F6E(T) (94.1%). Cells were rod-shaped, Gram-stain-negative, and non-motile. The isolate grew on NA, R2A, TSA, and LB agar. The temperature limits for growth were 10 and 30 A degrees C with an optimum at 25 A degrees C and the pH range was 7-8. Menaquinone MK-7 was the predominant respiratory quinone. The major cellular fatty acids comprised summed feature 3 (C-16:1 omega 6c/C-16:1 omega 7c, 30.2%), C-16:1 omega 5c (22.2%), iso C-15:0 (12.9%), and C-16:0 (8.8%). Phosphatidylethanolamine was identified as the major polar lipid. The G+C content of the genomic DNA was 48.4 mol%. The results obtained from the polyphasic analyses allowed for the genotypic and phenotypic differentiation of strain 15J9-4(T) from recognized Spirosoma species. Therefore, the isolate is considered to represent a novel species in the genus Spirosoma, for which the name Spirosoma terrae sp. nov. is proposed. The type strain is 15J9-4(T) (= KCTC 52035(T) = JCM 31994(T)).
引用
收藏
页码:492 / 498
页数:7
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