Conformational analysis of lignin models: a chemometric approach

被引:3
|
作者
Castilho-Almeida, Eduardo W. [1 ]
De Almeida, Wagner B. [2 ]
Dos Santos, Helio F. [1 ]
机构
[1] Univ Fed Juiz de Fora, Dept Quim, ICE, BR-36036330 Juiz De Fora, MG, Brazil
[2] Univ Fed Minas Gerais, Dept Quim, ICEx, BR-31270901 Belo Horizonte, MG, Brazil
关键词
Lignin; Box-Behnken design; Conformational analysis; Quantum mechanical calculation; CRYSTAL-STRUCTURE; MOLECULAR-DYNAMICS; STEREOCHEMISTRY; SIMULATION; COMPOUND;
D O I
10.1007/s00894-012-1689-4
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
In the present work, conformational analysis of lignin models was accomplished by considering four cross-link types (3-5', beta-5', alpha-O-4 and beta-O-4) and three monomer units [guaiacyl (G), p-hydroxyphenyl (H) and syringyl (S)]. Analysis involving the 3-5' and beta-5' dimers was conducted following the standard procedure, i.e., rotating the monomers around the single bond. On the other hand, analysis of alpha-O-4 and beta-O-4 dimers followed a distinct protocol with the aid of an interesting chemometric tool called Box-Behnken (BB) design. This methodology was applied with the aim of screening the most relevant dihedral angles. The results show that the conformational space for large systems with several dihedral angles can be mapped satisfactorily through the BB approach, reducing the number of dimensions to be treated at the quantum mechanical level. Furthermore, the quantum mechanics-chemometry-quantum mechanics (QM/BB/QM) method proposed here allows us to determine calculated torsional angles for lignin models in good agreement with crystallographic data for some model compounds.
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页码:2149 / 2163
页数:15
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