Prognostic value of a microRNA signature as a novel biomarker in patients with lower-grade gliomas

被引:34
|
作者
Qian, Zenghui [1 ,2 ]
Li, Yiming [1 ,2 ]
Fan, Xing [1 ,2 ]
Zhang, Chuanbao [1 ,2 ]
Wang, Yinyan [1 ,2 ]
Jiang, Tao [1 ,2 ,3 ]
Liu, Xing [1 ,2 ]
机构
[1] Capital Med Univ, Beijing Neurosurg Inst, 6 Tiantanxili, Beijing 100050, Peoples R China
[2] Capital Med Univ, Beijing Tiantan Hosp, Dept Neurosurg, 6 Tiantanxili, Beijing 100050, Peoples R China
[3] Beijing Inst Brain Disorders, Ctr Brain Tumor, Beijing, Peoples R China
关键词
MicroRNA; miRNA signature; Prognosis; Lower-grade gliomas; GLIOBLASTOMA-MULTIFORME; EXPRESSION; TUMORS; SURVIVAL; REVEALS; GENOME; CLASSIFICATION; TEMOZOLOMIDE; MUTATIONS; IDH;
D O I
10.1007/s11060-017-2704-5
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
MicroRNAs (miRNAs) may act as prognostic biomarkers in a variety of cancers. The aim of this study was to identify and evaluate a prognostic miRNA signature in patients with lower-grade gliomas (LGGs). miRNA expression profiles and clinical data of patients with LGGs from the Chinese Glioma Genome Atlas (CGGA; the training cohort) and The Cancer Genome Atlas (TCGA; the validation cohort) were analyzed, and the least absolute shrinkage and selection operator Cox regression model was used to identify the miRNA signature, which was combined with clinical prognostic factors to develop an individualized survival prediction model. Gene ontology analysis and Kyoto Encyclopedia of Genes and Genomes pathway analysis were conducted to reveal the biological implications of the signature. We identified a four-miRNA signature that stratified patients in the training cohort into low- or high-risk groups according to overall survival time, a finding that was verified in the validation cohort. Multivariate Cox regression analysis indicated that the four-miRNA signature was an independent prognostic biomarker, and a nomogram combining this miRNA signature with clinicopathological and molecular factors showed high prognostic accuracy for individualized survival prediction in both TCGA (C-index = 0.83) and CGGA (C-index = 0.68) cohorts. Functional annotation indicated that the major biological processes of this prognostic miRNA signature were enriched in cell cycle and DNA repair-associated biological processes. Our findings indicated that our newly discovered four-miRNA signature may be an effective independent prognostic factor for the prediction of patients with LGGs.
引用
收藏
页码:127 / 137
页数:11
相关论文
共 50 条
  • [1] Prognostic value of a microRNA signature as a novel biomarker in patients with lower-grade gliomas
    Zenghui Qian
    Yiming Li
    Xing Fan
    Chuanbao Zhang
    Yinyan Wang
    Tao Jiang
    Xing Liu
    [J]. Journal of Neuro-Oncology, 2018, 137 : 127 - 137
  • [2] Identification of an epigenetic prognostic signature for patients with lower-grade gliomas
    Yu, Hai
    Zhang, Duanni
    Lian, Minxue
    [J]. CNS NEUROSCIENCE & THERAPEUTICS, 2021, 27 (04) : 470 - 483
  • [3] Prognostic and predictive value of an immune infiltration signature in diffuse lower-grade gliomas
    Song, Lai-Rong
    Weng, Jian-Cong
    Li, Cheng-Bei
    Huo, Xu-Lei
    Li, Huan
    Hao, Shu-Yu
    Wu, Zhen
    Wang, Liang
    Li, Da
    Zhang, Jun-Ting
    [J]. JCI INSIGHT, 2020, 5 (08)
  • [4] Prognostic value of γ-aminobutyric acidergic synapse-associated signature for lower-grade gliomas
    Jiang, Hongxiang
    Sun, Zhiqiang
    Li, Fei
    Chen, Qianxue
    [J]. FRONTIERS IN IMMUNOLOGY, 2022, 13
  • [5] A prognostic signature of five pseudogenes for predicting lower-grade gliomas
    Liu, Bo
    Liu, Jingping
    Liu, Kun
    Huang, Hao
    Li, Yexin
    Hu, Xiqi
    Wang, Ke
    Cao, Hui
    Cheng, Quan
    [J]. BIOMEDICINE & PHARMACOTHERAPY, 2019, 117
  • [6] Identification of a novel disulfideptosis-related gene signature for prognostic implication in lower-grade gliomas
    Zhang, Fuqiang
    Lv, Meihong
    He, Yi
    [J]. AGING-US, 2024, 16 (07): : 6054 - 6067
  • [7] Ferroptosis-related gene signature as a prognostic marker for lower-grade gliomas
    Zheng, Yi
    Ji, Qiang
    Xie, Lei
    Wang, Can
    Yu, Chun-Na
    Wang, Ya-Li
    Jiang, Jing
    Chen, Feng
    Li, Wen-Bin
    [J]. JOURNAL OF CELLULAR AND MOLECULAR MEDICINE, 2021, 25 (06) : 3080 - 3090
  • [8] Prognostic value of four immune-related genes in lower-grade gliomas: a biomarker discovery study
    Wang, Shuowen
    Wang, Zijun
    Liu, Zhuo
    Wu, Jianxin
    [J]. FRONTIERS IN GENETICS, 2024, 15
  • [9] Clusterin Is a Prognostic Biomarker of Lower-Grade Gliomas and Is Associated with Immune Cell Infiltration
    Ren, Xiaoyue
    Chang, Chao
    Qi, Teng
    Yang, Pengyu
    Wang, Yuanbo
    Zhou, Xiaorui
    Guan, Feng
    Li, Xiang
    [J]. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2023, 24 (17)
  • [10] A Novel Insight into Paraptosis-Related Classification and Signature in Lower-Grade Gliomas
    Qian, Xi-Feng
    Zhang, Jia-Hao
    Mai, Yue-Xue
    Yin, Xin
    Zheng, Yu-Bin
    Yu, Zi-Yuan
    Zhu, Guo-Dong
    Guo, Xu-Guang
    [J]. INTERNATIONAL JOURNAL OF GENOMICS, 2022, 2022