A novel method for large tree visualization

被引:3
|
作者
Heard, Jeff [1 ]
Kaufmann, William [2 ,3 ]
Guan, Xiaojun [1 ]
机构
[1] Renaissance Comp Inst, Chapel Hill, NC 27519 USA
[2] Univ N Carolina, Dept Pathol, Chapel Hill, NC 27599 USA
[3] Univ N Carolina, Lab Med, Chapel Hill, NC 27599 USA
关键词
D O I
10.1093/bioinformatics/btn656
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Many genomic and proteomic analyses generate as a result a tree of genes or proteins. These trees are often large (containing tens of thousands of nodes and edges), and need a visualization tool to fully display all the information contained in the tree. Clustering analysis can be performed on these trees to obtain clusters of proteins, and we need an efficient way to visualize the clustering results. We present a novel tree visualization tool to help with such analyses.
引用
收藏
页码:557 / 558
页数:2
相关论文
共 50 条
  • [1] A novel method for visualization of entire coronary arterial tree
    Wischgoll, Thomas
    Meyer, Joerg
    Kaimovitz, Benjamin
    Lanir, Yoram
    Kassab, Ghassan S.
    ANNALS OF BIOMEDICAL ENGINEERING, 2007, 35 (05) : 694 - 710
  • [2] A Novel Method for Visualization of Entire Coronary Arterial Tree
    Thomas Wischgoll
    Joerg Meyer
    Benjamin Kaimovitz
    Yoram Lanir
    Ghassan S. Kassab
    Annals of Biomedical Engineering, 2007, 35 : 694 - 710
  • [3] A Novel Phylogenetic Tree Data Visualization Application for Researchers
    Tahir, Shahzaib
    Afzal, Muhammad Tanvir
    2014 SCIENCE AND INFORMATION CONFERENCE (SAI), 2014, : 93 - 99
  • [4] A Novel Data Acquisition Method for Visualization of Large pH Changes by Chemical Imaging Sensor
    Miyamoto, Ko-ichiro
    Sakakita, Sakura
    Yoshinobu, Tatsuo
    ISIJ INTERNATIONAL, 2016, 56 (03) : 492 - 494
  • [5] Fisheye view for visualization of large tree by packing nested circles
    Ren, Lei
    Wang, Weixin
    Teng, Dongxing
    Ma, Cuixia
    Dai, Guozhong
    Wang, Hongan
    Jisuanji Fuzhu Sheji Yu Tuxingxue Xuebao/Journal of Computer-Aided Design and Computer Graphics, 2008, 20 (03): : 298 - 303
  • [6] Towards Pie Tree Visualization of Graphs and Large Software Architectures
    Samia, Mireille
    Leuschel, Michael
    ICPC: 2009 IEEE 17TH INTERNATIONAL CONFERENCE ON PROGRAM COMPREHENSION, 2009, : 301 - 302
  • [7] A Novel FEM Method of Modeling and Visualization
    Han, Gang
    Zhang, Jinying
    Li, Baoliang
    Lu, Jia
    Dou, Wenhua
    PROCEEDINGS OF THE 2012 SECOND INTERNATIONAL CONFERENCE ON INSTRUMENTATION & MEASUREMENT, COMPUTER, COMMUNICATION AND CONTROL (IMCCC 2012), 2012, : 1476 - 1479
  • [8] A Novel Method for Haplotype Clustering and Visualization
    Teo, Yik Y.
    Small, Kerrin S.
    GENETIC EPIDEMIOLOGY, 2010, 34 (01) : 34 - 41
  • [9] A Novel Method for Visualization of Clustering Results
    Gao, Chao
    Zhang, Caiya
    COMMUNICATIONS IN STATISTICS-SIMULATION AND COMPUTATION, 2010, 39 (05) : 1049 - 1056
  • [10] A parallel decision tree builder for mining very large visualization datasets
    Bowyer, KW
    Hall, LO
    Moore, T
    Chawla, N
    SMC 2000 CONFERENCE PROCEEDINGS: 2000 IEEE INTERNATIONAL CONFERENCE ON SYSTEMS, MAN & CYBERNETICS, VOL 1-5, 2000, : 1888 - 1893