Circular fingerprints: Flexible molecular descriptors with applications from physical chemistry to ADME

被引:0
|
作者
Glen, RC
Bender, A
Arnby, CH
Carlsson, L
Boyer, S
Smith, J
机构
[1] Univ Cambridge, Dept Chem, Unilever Ctr Mol Sci Informat, Cambridge CB2 1EW, England
[2] AstraZeneca R&D Molndal, Safety Assessment, SE-43183 Molndal, Sweden
[3] Univ Erlangen Nurnberg, Comp Chem Centrum, D-91052 Erlangen, Germany
关键词
ADME; ADME prediction; circular fingerprints; metabolism; metabolism prediction; pK(a) prediction; protonation state; similarity searching; virtual screening;
D O I
暂无
中图分类号
R9 [药学];
学科分类号
1007 ;
摘要
Circular fingerprints - the representation Of molecular structures by atom neighborhoods - have been applied to a wide range of applications, such as similarity searching and the prediction of absorption, distribution, metabolism, excretion and toxicity properties. In recent years there has been a surge in applications resulting from the superior performance of circular fingerprints in comparative studies. This feature examines the nature of circular fingerprints as well as their applications, including virtual screening, metabolism prediction and the estimation of pK(a) constants.
引用
收藏
页码:199 / 204
页数:6
相关论文
共 50 条
  • [1] Circular fingerprints: Flexible molecular descriptors with applications from physical chemistry to ADME (vol 9, pg 199, 2006)
    Glen, RC
    Bender, A
    Arnby, CH
    Carlsson, L
    Boyer, S
    Smith, J
    IDRUGS, 2006, 9 (04) : 311 - 311
  • [2] CINF 61-Comparison of machine learning algorithms to predict ADME properties using chemical descriptors and molecular fingerprints
    Klon, Anthony E.
    Diller, David J.
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2008, 236
  • [3] Fully flexible pharmacophore multiplet bitmaps as molecular descriptors: Implementation and applications
    Fox, P
    Abrahamian, E
    Clark, RD
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2003, 225 : U790 - U790
  • [4] Prediction of physical properties for PCB congeners from molecular descriptors
    Öberg, T
    INTERNET JOURNAL OF CHEMISTRY, 2001, 4 (11): : art. no. - 11
  • [5] QSPR study on refractive indices of solvents commonly used in polymer chemistry using flexible molecular descriptors
    Fioressi, S. E.
    Bacelo, D. E.
    Cui, W. P.
    Saavedra, L. M.
    Duchowicz, P. R.
    SAR AND QSAR IN ENVIRONMENTAL RESEARCH, 2015, 26 (06) : 499 - 506
  • [6] Predicting the Metabolic Sites by Flavin Containing Monooxygenase on Drug Molecules Using SVM Classification on Computed Quantum Mechanics and Circular Fingerprints Molecular Descriptors
    Fu, Chien-wei
    Lin, Thy-Hou
    PLOS ONE, 2017, 12 (01):
  • [7] Combining machine learning and quantum mechanics yields more chemically aware molecular descriptors for medicinal chemistry applications
    Tortorella, Sara
    Carosati, Emanuele
    Sorbi, Giulia
    Bocci, Giovanni
    Cross, Simon
    Cruciani, Gabriele
    Storchi, Loriano
    JOURNAL OF COMPUTATIONAL CHEMISTRY, 2021, 42 (29) : 2068 - 2078
  • [8] Amphiphile nanoarchitectonics: from basic physical chemistry to advanced applications
    Ramanathan, Muruganathan
    Shrestha, Lok Kumar
    Mori, Taizo
    Ji, Qingmin
    Hill, Jonathan P.
    Ariga, Katsuhiko
    PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 2013, 15 (26) : 10580 - 10611
  • [9] "Texas-Sized" Molecular Boxes: From Chemistry to Applications
    Chi, Xiaodong
    Tian, Jinya
    Luo, Dan
    Gong, Han-Yuan
    Huang, Feihe
    Sessler, Jonathan L.
    MOLECULES, 2021, 26 (09):