PICALM as a Novel Prognostic Biomarker and Its Correlation with Immune Infiltration in Breast Cancer

被引:0
|
作者
Naer, A. [1 ,2 ,3 ,4 ]
Lyu, Pengfei [5 ]
Yu, Yue [1 ]
Liu, Meiling [6 ]
Cheng, Shaohua [6 ]
Chen, Meiyan [6 ]
Liu, Yunhong [6 ]
Cao, Xuchen [1 ,2 ,3 ,4 ]
机构
[1] Tianjin Med Univ Canc Inst & Hosp, Dept Breast Canc 1, Natl Clin Res Ctr Canc, Huanhuxi Rd, Tianjin 300060, Peoples R China
[2] Key Lab Canc Prevent & Therapy, Tianjin 300060, Peoples R China
[3] Tianjins Clin Res Ctr Canc, Tianjin 300060, Peoples R China
[4] Tianjin Med Univ, Key Lab Breast Canc Prevent & Therapy, Minist Educ, Tianjin 300060, Peoples R China
[5] Hainan Med Univ, Affiliated Hosp 1, Dept Breast Surg, Haikou 570102, Peoples R China
[6] Shenzhen Baoan Dist Songgang Peoples Hosp, Dept Thyroid & Breast Surg, 2 Shajiang Rd, Shenzhen 518105, Guangdong, Peoples R China
关键词
PICALM; Breast cancer; Biomarker; Prognosis; Nomogram; Methylation; Immune infiltration; ACUTE MYELOID-LEUKEMIA; CLATHRIN; FUSION; PROTEIN; GENE; INVASION; CELLS; CALM;
D O I
10.1007/s12010-023-04840-z
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
PICALM (phosphatidylinositol-binding clathrin assembly protein) mutations have been linked to a number of human disorders, including leukemia, Alzheimer's disease, and Parkinson's disease. Nevertheless, the effect of PICALM on cancer, particularly on prognosis and immune infiltration in individuals with BRCA, is unknown. We obtained the data of breast cancer patients from The Cancer Genome Atlas (TCGA) database, and analyzed the expression of PICALM in breast cancer, its impact on survival' and its role in tumor immune invasion. Finally, in vitro cellular experiments were performed to validate the results. Research has found that PICALM expression was shown to be downregulated in BRCA and to be substantially linked with clinical stage, histological type, PAM50, and age. PICALM downregulation was linked to a lower overall survival (OS) and disease-specific survival (DSS) in BRCA patients. A multivariate Cox analysis revealed that PICALM is an independent predictor of OS. The enriched pathways revealed by functional enrichment analysis included oxidative phosphorylation, angiogenesis, the TGF signaling pathway, and the IL-6/JAK/STAT3 signaling system. Furthermore, the amount of immune cell infiltration by B cells, eosinophils, mast cells, neutrophils, and T cells was positively linked with PICALM expression. Finally, we experimentally verified that low expression of PICALM can reduce proliferation, migration, and invasion in tumor cells. This evidence shows that PICALM expression impacts prognosis, immune infiltration, and pathway expression in breast cancer patients, and it might be a potential predictive biomarker for the disease.
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页数:17
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