Hypergraph convolutional network for longitudinal data analysis in Alzheimer's disease

被引:3
|
作者
Hao, Xiaoke [1 ]
Li, Jiawang [1 ]
Ma, Mingming [1 ]
Qin, Jing [2 ]
Zhang, Daoqiang [3 ]
Liu, Feng [4 ]
机构
[1] Hebei Univ Technol, Sch Artificial Intelligence, Tianjin 300401, Peoples R China
[2] Hong Kong Polytech Univ, Ctr Smart Hlth, Sch Nursing, Hong Kong 999077, Peoples R China
[3] Nanjing Univ Aeronaut & Astronaut, Coll Comp Sci & Technol, Nanjing 211106, Peoples R China
[4] Tianjin Med Univ, Gen Hosp, Dept Radiol, Tianjin 300052, Peoples R China
基金
中国国家自然科学基金;
关键词
Alzheimer's disease; Structural magnetic resonance imaging; Hypergraph convolutional network; Longitudinal data; Weighted fusion; GYRUS;
D O I
10.1016/j.compbiomed.2023.107765
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Alzheimer's disease (AD) is an irreversible and progressive neurodegenerative disease. Longitudinal structural magnetic resonance imaging (sMRI) data have been widely used for tracking AD pathogenesis and diagnosis. However, existing methods tend to treat each time point equally without considering the temporal characteristics of longitudinal data. In this paper, we propose a weighted hypergraph convolution network (WHGCN) to use the internal correlations among different time points and leverage high-order relationships between subjects for AD detection. Specifically, we construct hypergraphs for sMRI data at each time point using the K-nearest neighbor (KNN) method to represent relationships between subjects, and then fuse the hypergraphs according to the importance of the data at each time point to obtain the final hypergraph. Subsequently, we use hypergraph convolution to learn high-order information between subjects while performing feature dimensionality reduction. Finally, we conduct experiments on 518 subjects selected from the Alzheimer's disease neuroimaging initiative (ADNI) database, and the results show that the WHGCN can get higher AD detection performance and has the potential to improve our understanding of the pathogenesis of AD.
引用
收藏
页数:10
相关论文
共 50 条
  • [1] An Evolving Hypergraph Convolutional Network for the Diagnosis of Alzheimer's Disease
    Wang, Xinlei
    Xin, Junchang
    Wang, Zhongyang
    Li, Chuangang
    Wang, Zhiqiong
    [J]. DIAGNOSTICS, 2022, 12 (11)
  • [2] A Novel Joint Brain Network Analysis Using Longitudinal Alzheimer's Disease Data
    Kundu, Suprateek
    Lukemire, Joshua
    Wang, Yikai
    Guo, Ying
    Weiner, Michael W.
    Schuff, Norbert
    Rosen, Howard J.
    Miller, Bruce L.
    Neylan, Thomas
    Hayes, Jacqueline
    Finley, Shannon
    Aisen, Paul
    Khachaturian, Zaven
    Thomas, Ronald G.
    Donohue, Michael
    Walter, Sarah
    Gessert, Devon
    Sather, Tamie
    Jiminez, Gus
    Thal, Leon
    Brewer, James
    Vanderswag, Helen
    Fleisher, Adam
    Davis, Melissa
    Morrison, Rosemary
    Petersen, Ronald
    Jack, Clifford R.
    Bernstein, Matthew
    Borowski, Bret
    Gunter, Jeff
    Senjem, Matt
    Vemuri, Prashanthi
    Jones, David
    Kantarci, Kejal
    Ward, Chad
    Mason, Sara S.
    Albers, Colleen S.
    Knopman, David
    Johnson, Kris
    Jagust, William
    Landau, Susan
    Trojanowki, John Q.
    Shaw, Leslie M.
    Lee, Virginia
    Korecka, Magdalena
    Figurski, Michal
    Arnold, Steven E.
    Karlawish, Jason H.
    Wolk, David
    Toga, Arthur W.
    [J]. SCIENTIFIC REPORTS, 2019, 9 (1)
  • [3] A Novel Joint Brain Network Analysis Using Longitudinal Alzheimer’s Disease Data
    Suprateek Kundu
    Joshua Lukemire
    Yikai Wang
    Ying Guo
    [J]. Scientific Reports, 9
  • [4] Alzheimer’s disease classification based on nonlinear high-order features and hypergraph convolutional neural network
    Zeng, An
    Luo, Bairong
    Pan, Dan
    Rong, Huabin
    Cao, Jianfeng
    Zhang, Xiaobo
    Lin, Jing
    Yang, Yang
    Liu, Jun
    [J]. Shengwu Yixue Gongchengxue Zazhi/Journal of Biomedical Engineering, 2023, 40 (05): : 852 - 858
  • [5] Characterization Multimodal Connectivity of Brain Network by Hypergraph GAN for Alzheimer's Disease Analysis
    Pan, Junren
    Lei, Baiying
    Shen, Yanyan
    Liu, Yong
    Feng, Zhiguang
    Wang, Shuqiang
    [J]. PATTERN RECOGNITION AND COMPUTER VISION,, PT III, 2021, 13021 : 467 - 478
  • [6] Analysis of longitudinal data in an Alzheimer's disease clinical trial
    Thomas, RG
    Berg, JD
    Sano, M
    Thal, L
    [J]. STATISTICS IN MEDICINE, 2000, 19 (11-12) : 1433 - 1440
  • [7] A hybrid Convolutional and Recurrent Neural Network for Hippocampus Analysis in Alzheimer's Disease
    Li, Fan
    Liu, Manhua
    [J]. JOURNAL OF NEUROSCIENCE METHODS, 2019, 323 : 108 - 118
  • [8] FSNet: Dual Interpretable Graph Convolutional Network for Alzheimer's Disease Analysis
    Li, Hengxin
    Shi, Xiaoshuang
    Zhu, Xiaofeng
    Wang, Shuihua
    Zhang, Zheng
    [J]. IEEE TRANSACTIONS ON EMERGING TOPICS IN COMPUTATIONAL INTELLIGENCE, 2023, 7 (01): : 15 - 25
  • [9] Explainable and programmable hypergraph convolutional network for data fusion
    Bi, Xia-an
    Luo, Sheng
    Jiang, Siyu
    Wang, Yu
    Xing, Zhaoxu
    Xu, Luyun
    [J]. INFORMATION FUSION, 2023, 100
  • [10] A Model of Volumetric Shape for the Analysis of Longitudinal Alzheimer's Disease Data
    Liu, Xinyang
    Liu, Xiuwen
    Shi, Yonggang
    Thompson, Paul
    Mio, Washington
    [J]. COMPUTER VISION-ECCV 2010, PT III, 2010, 6313 : 594 - +