Fine-Grained Relation Extraction for Drug Instructions Using Contrastive Entity Enhancement

被引:1
|
作者
Gao, Feng [1 ,2 ,3 ]
Song, Xuren [1 ,2 ,3 ]
Gu, Jinguang [1 ,2 ,3 ]
Zhang, Lihua [4 ]
Liu, Yun [5 ]
Zhang, Xiaoliang [5 ,6 ]
Liu, Yu [1 ,2 ,3 ]
Jing, Shenqi [5 ,6 ]
机构
[1] Wuhan Univ Sci & Technol, Dept Comp Sci & Technol, Wuhan 430065, Peoples R China
[2] Inst Sci & Tech Informat China, Key Lab Rich Media Knowledge Org, Beijing 100038, Peoples R China
[3] Inst Sci & Tech Informat China, Serv Digital Publishing Content, Beijing 100038, Peoples R China
[4] East China Jiaotong Univ, Sch Software, Nanchang 330013, Peoples R China
[5] Nanjing Med Univ, Sch Biomed Engn & Informat, Dept Med Informat, Nanjing 211166, Jiangsu, Peoples R China
[6] Nanjing Med Univ, Jiangsu Prov Hosp, Ctr Data Management, Affiliated Hosp 1, Nanjing 210029, Jiangsu, Peoples R China
基金
中国国家自然科学基金;
关键词
Drug delivery; Data mining; Data models; Bit error rate; Semantics; Task analysis; Contrastive learning; drug instruction; entity enhancement; fine-grained; relation extraction;
D O I
10.1109/ACCESS.2023.3279288
中图分类号
TP [自动化技术、计算机技术];
学科分类号
0812 ;
摘要
The extraction of relations between drug-related entities from drug instructions is essential for clinical diagnostic decision-making and drug use regulations, which is a critical task. However, due to the complexity of the textual descriptions in drug instructions, it is challenging to extract fine-grained relations, even with a considerable amount of training data. Moreover, since manually-labeled, high-quality datasets in the pharmaceutical domain are typically expensive, obtaining an extensive and accurate training dataset could be challenging. To overcome the above challenges, this paper proposes a drug relation extraction framework that combines entity information enhancement and contrastive feature learning, which can better extract fine-grained relations with limited data. More specifically, a sample generator creates a group of different samples with role semantic information from the training set, an entity encoder embeds the entity role information and context information to enhance the semantic representation, and a contrastive learning module employs a hybrid loss function to learn inter-sample and intra-sample differences. Empirical study indicates that the contrastive entity enhancement approach can achieve higher extraction accuracy and has better generalization capability. More specifically, the experimental results show that the F1 value of the model can reach 0.8892, which provides a 7.13% improvement compared to the baseline pre-training method.
引用
收藏
页码:51777 / 51788
页数:12
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