Ubiquitin specific peptidase 37 and PCNA interaction promotes osteosarcoma pathogenesis by modulating replication fork progression

被引:3
|
作者
Chauhan, Ravi [1 ]
Gupta, Ashna [1 ]
Malhotra, Lakshay [2 ]
Bhat, Ajaz A. [3 ]
Pandita, Raj K. [4 ]
Masoodi, Tariq [5 ]
Dagar, Gunjan [1 ]
Sadida, Hana Q. [3 ]
Al-Marzooqi, Sara K. [3 ]
Batra, Atul [6 ]
Bakhshi, Sameer [6 ]
Sharma, Mehar Chand [7 ]
Tanwar, Pranay [8 ]
Khan, Shah Alam [9 ]
Samath, Ethayathulla Abdul [2 ]
Uddin, Shahab [10 ]
Akil, Ammira S. Al-Shabeeb [3 ]
Haris, Mohammad [11 ]
Macha, Muzafar A. [12 ]
Pandita, Tej K. [4 ]
Singh, Mayank [1 ]
机构
[1] All India Inst Med Sci AIIMS, Dept Med Oncol, Dr BRAIRCH, Lab, New Delhi 110029, Delhi, India
[2] All India Inst Med Sci, Dept Biophys, New Delhi, India
[3] Dept Human Genet Precis Med Diabet, Obes & Canc Res Program Sidra Med, Doha, Qatar
[4] Texas A&M Coll Med, Ctr Genom & Precis Med, Houston, TX USA
[5] Lab Canc Immunol & Genet, Sidra Med, Doha, Qatar
[6] All India Inst Med Sci, Dept Med Oncol, New Delhi, India
[7] All India Inst Med Sci, Dept Pathol, New Delhi, India
[8] All India Inst Med Sci AIIMS, Dr BRAIRCH, Dept Lab Oncol, New Delhi, India
[9] All India Inst Med Sci AIIMS, Dr BRAIRCH, Dept Orthopaed, New Delhi, India
[10] Hamad Med Corp, Translat Res Inst, Acad Hlth Syst, Doha, Qatar
[11] Univ Penn, Ctr Adv Metab Imaging Precis Med, Perelman Sch Med, Dept Radiol, Philadelphia, PA USA
[12] Islamic Univ Sci & Technol, Watson Crick Ctr Mol Med, Pulwama, India
关键词
Deubiquitinating enzymes; Ubiquitin specific protease 37; Proliferating cell nuclear antigen; Replication stress; Metastasis; USP37; CHEMOTHERAPY; ENZYMES; CANCER; SERVER; TUMORIGENESIS; METHOTREXATE; CYTOSCAPE; SURVIVAL; PATHWAY;
D O I
10.1186/s12967-023-04126-2
中图分类号
R-3 [医学研究方法]; R3 [基础医学];
学科分类号
1001 ;
摘要
BackgroundOsteosarcoma is a type of bone cancer that predominantly affects young individuals, including children and adolescents. The disease progresses through heterogeneous genetic alterations, and patients often develop pulmonary metastases even after the primary tumors have been surgically removed. Ubiquitin-specific peptidases (USPs) regulate several critical cellular processes, such as cell cycle progression, transcriptional activation, and signal transduction. Various studies have revealed the significance of USP37 in the regulation of replication stress and oncogenesis.MethodsIn this study, the Cancer Genome Atlas (TCGA) database was analyzed to investigate USP37 expression. RNA sequencing was utilized to assess the impact of USP37 overexpression and depletion on gene expression in osteosarcoma cells. Various molecular assays, including colony formation, immunofluorescence, immunoprecipitation, and DNA replication restart, were employed to examine the physical interaction between USP37 and PCNA, as well as its physiological effects in osteosarcoma cells. Additionally, molecular docking studies were conducted to gain insight into the nature of the interaction between USP37 and PCNA. Furthermore, immunohistochemistry was performed on archived tissue blocks from osteosarcoma patients to establish a correlation between USP37 and PCNA expression.ResultsAnalysis of the TCGA database revealed that increased expression of USP37 was linked to decreased progression-free survival (PFS) in osteosarcoma patients. Next-generation sequencing analysis of osteosarcoma cells demonstrated that overexpression or knockdown of USP37 led to the expression of different sets of genes. USP37 overexpression provided a survival advantage, while its depletion heightened sensitivity to replication stress in osteosarcoma cells. USP37 was found to physically interact with PCNA, and molecular docking studies indicated that the interaction occurs through unique residues. In response to genotoxic stress, cells that overexpressed USP37 resolved DNA damage foci more quickly than control cells or cells in which USP37 was depleted. The expression of USP37 varied in archived osteosarcoma tissues, with intermediate expression seen in 52% of cases in the cohort examined.ConclusionThe results of this investigation propose that USP37 plays a vital role in promoting replication stress tolerance in osteosarcoma cells. The interaction between USP37 and PCNA is involved in the regulation of replication stress, and disrupting it could potentially trigger synthetic lethality in osteosarcoma. This study has expanded our knowledge of the mechanism through which USP37 regulates replication stress, and its potential as a therapeutic target in osteosarcoma merits additional exploration.
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页数:24
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