Genomic Expedition: Deciphering Human Adenovirus Strains from the 2023 Outbreak in West Bengal, India: Insights into Viral Evolution and Molecular Epidemiology

被引:1
|
作者
Chatterjee, Ananya [1 ]
Bhattacharjee, Uttaran [2 ]
Gupta, Rudrak [1 ]
Debnath, Ashis [1 ]
Majumdar, Agniva [1 ]
Saha, Ritubrita [2 ]
Chawla-Sarkar, Mamta [2 ]
Chakrabarti, Alok Kumar [2 ]
Dutta, Shanta [1 ]
Sironi, Manuela
Cagliani, Rachele
机构
[1] Natl Inst Cholera & Enter Dis, ICMR, Virus Res & Diagnost Lab, Kolkata 700010, W Bengal, India
[2] Natl Inst Cholera & Enter Dis, ICMR, Div Virol, Kolkata 700010, W Bengal, India
来源
VIRUSES-BASEL | 2024年 / 16卷 / 01期
关键词
respiratory adenovirus; outbreak; whole genome sequencing; recombinant strain; genetic characterisation; PROTEIN-PROTEIN; RECOMBINATION; DOCKING; DOMAIN; SERVER; VIRUS; HDOCK;
D O I
10.3390/v16010159
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Understanding the genetic dynamics of circulating Human Adenovirus (HAdV) types is pivotal for effectively managing outbreaks and devising targeted interventions. During the West Bengal outbreak of 2022-2023, an investigation into the genetic characteristics and outbreak potential of circulating HAdV types was conducted. Twenty-four randomly selected samples underwent whole-genome sequencing. Analysis revealed a prevalent recombinant strain, merging type 3 and type 7 of human mastadenovirus B1 (HAd-B1) species, indicating the emergence of recent strains of species B in India. Furthermore, distinctions in VA-RNAs and the E3 region suggested that current circulating strains of human mastadenovirus B1 (HAd-B1) possess the capacity to evade host immunity, endure longer within hosts, and cause severe respiratory infections. This study underscores the significance of evaluating the complete genome sequence of HAdV isolates to glean insights into their outbreak potential and the severity of associated illnesses.
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