Coupling allows robust mammalian redox circadian rhythms despite heterogeneity and noise

被引:1
|
作者
del Olmo, Marta [1 ,2 ]
Kalashnikov, Anton [1 ,2 ]
Schmal, Christoph [1 ,2 ]
Kramer, Achim [3 ]
Herzel, Hanspeter [1 ,2 ]
机构
[1] Humboldt Univ, Inst Theoret Biol, Philippstr 13, D-10115 Berlin, Germany
[2] Charite Univ Med Berlin, Philippstr 13, D-10115 Berlin, Germany
[3] Charite Univ Med Berlin, Inst Med Immunol, Lab Chronobiol, Charitepl 1, D-10117 Berlin, Germany
关键词
Circadian clocks; Redox; Modeling; Noise; Heterogeneity; INDIVIDUAL FIBROBLASTS; PHASE OSCILLATOR; GENE-EXPRESSION; CLOCK; FEEDBACK; PEROXIREDOXINS; BINDING; ENTRAINMENT; SPECIFICITY; MECHANISMS;
D O I
10.1016/j.heliyon.2024.e24773
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Circadian clocks are endogenous oscillators present in almost all cells that drive daily rhythms in physiology and behavior. There are two mechanisms that have been proposed to explain how circadian rhythms are generated in mammalian cells: through a transcription -translation feedback loop (TTFL) and based on oxidation/reduction reactions, both of which are intrinsically stochastic and heterogeneous at the single cell level. In order to explore the emerging properties of stochastic and heterogeneous redox oscillators, we simplify a recently developed kinetic model of redox oscillations to an amplitude -phase oscillator with 'twist' (period -amplitude correlation) and subject to Gaussian noise. We show that noise and heterogeneity alone lead to fast desynchronization, and that coupling between noisy oscillators can establish robust and synchronized rhythms with amplitude expansions and tuning of the period due to twist. Coupling a network of redox oscillators to a simple model of the TTFL also contributes to synchronization, large amplitudes and fine-tuning of the period for appropriate interaction strengths. These results provide insights into how the circadian clock compensates randomness from intracellular sources and highlight the importance of noise, heterogeneity and coupling in the context of circadian oscillators.
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页数:14
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