Pan-cancer analysis of the oncogenic role of HNRNPR in human tumors

被引:3
|
作者
Yang, Yi [1 ]
Sun, Jun-Die [1 ]
Xiang, Zuo-Lin [1 ,2 ,3 ]
机构
[1] Tongji Univ, Shanghai East Hosp, Sch Med, Dept Radiat Oncol, Shanghai, Peoples R China
[2] Shanghai East Hosp Jian Hosp, Dept Radiat Oncol, Jian, Jiangxi, Peoples R China
[3] Tongji Univ, Sch Med, Shanghai East Hosp, Dept Radiat Oncol, 150 Jimo Rd, Shanghai, Peoples R China
基金
中国国家自然科学基金;
关键词
biomarker; HCC; HNRNPR; pan-cancer; prognosis; GENE-EXPRESSION SIGNATURE; MUTATIONAL BURDEN; RNA; BINDING; PROTEIN; BIOMARKERS;
D O I
10.1002/cbin.12027
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Heterogeneous nuclear ribonucleoproteins (hnRNPs) are potential cancer biomarkers. Little is known about the role of HNRNPR, an essential member of the hnRNP family, in human tumours. This study aims to explore the potential value of HNRNPR across cancers, based on The Cancer Genome Atlas (TCGA). The expression level, mutation, DNA methylation, phosphorylation status, survival status, pathological stage, tumor mutation burden (TMB), microsatellite instability (MSI), immune cell infiltration, and immune signature related to HNRNPR were analyzed. HNRNPR expression level was increased in several types of cancer and was associated with poor prognosis, especially in liver hepatocellular carcinoma (LIHC). HNRNPR was also correlated with antitumour immunity, and associated with TMB, MSI, and immune cell activation status across cancers. Furthermore, nomograms were established to predict the prognosis of LIHC, based on HNRNPR and other clinical characteristics. Functional enrichment analysis showed the mechanisms of HNRNPR-mediated LIHC progression. Loss-of-function experiments demonstrated that inhibition of HNRNPR could remarkably suppress hepatocellular carcinoma (HCC) cell proliferation, migration, invasion, and Epithelial-Mesenchymal Transition abilities. Our study offers a comprehensive understanding of the oncogenic roles of HNRNPR across different tumours, and demonstrates that HNRNPR might foster the proliferation, migration, and invasion abilities of HCC cells.
引用
收藏
页码:1406 / 1426
页数:21
相关论文
共 50 条
  • [1] Pan-cancer analysis of the oncogenic role of HNRNPR in human tumors (vol 47, pg 1406, 2023)
    Yang, Y.
    Sun, J. D.
    Xiang, Z. L.
    CELL BIOLOGY INTERNATIONAL, 2024, 48 (02) : 229 - 229
  • [2] The oncogenic role of SNRPB in human tumors: A pan-cancer analysis
    Wu, Juan
    Lu, Feng
    Yu, Bin
    Wang, Wenjun
    Ye, Xiaoqun
    FRONTIERS IN MOLECULAR BIOSCIENCES, 2022, 9
  • [3] A pan-cancer analysis of the oncogenic role of YKT6 in human tumors
    Zhang, Xuezhong
    Dapar, Mark Lloyd G.
    Zhang, Xin
    Chen, Yingjun
    MEDICINE, 2023, 102 (15) : E33546
  • [4] Oncogenic role of TWF2 in human tumors: A pan-cancer analysis
    Liu, Wenjie
    Huo, Gengwei
    Chen, Peng
    OPEN MEDICINE, 2022, 17 (01): : 1425 - 1437
  • [5] A pan-cancer analysis of the oncogenic role of Holliday junction recognition protein in human tumors
    Su, Rong
    Huang, Hechen
    Gao, Xingxing
    Zhou, Yuan
    Yin, Shengyong
    Xie, Haiyang
    Zhou, Lin
    Zheng, Shusen
    OPEN MEDICINE, 2022, 17 (01): : 317 - 328
  • [6] An Integrative Pan-Cancer Analysis of the Oncogenic Role of COPB2 in Human Tumors
    Wu, Biao
    Wu, Yumeng
    Guo, Xianlin
    Yue, Yanping
    Li, Yuanyuan
    He, Xiao
    Chen, Yuanbin
    Zhao, Wenjing
    Liu, Jibin
    Wu, Xuming
    Shen, Aiguo
    Zhang, Suqing
    BIOMED RESEARCH INTERNATIONAL, 2021, 2021
  • [7] Pan-cancer analysis of the oncogenic role of the core osteosarcoma gene VCAN in human tumors
    Zhou, Haidong
    Lu, Dinggui
    Yu, Dianbo
    Luo, Changtai
    Xie, Kangqi
    Ma, Huade
    Li, Shanlang
    Liang, Jiyun
    Wei, Fengxu
    Chen, Luchang
    Luo, Dong
    Wang, Wei
    Wei, Jihua
    AMERICAN JOURNAL OF TRANSLATIONAL RESEARCH, 2023, 15 (09): : 5556 - 5573
  • [8] Oncogenic role and drug sensitivity of ETV4 in human tumors: a pan-cancer analysis
    Zhang, Rui
    Peng, Yanfang
    Gao, Zhe
    Qian, Jing
    Yang, Kang
    Wang, Xinfa
    Lu, Wenjing
    Zhu, Yongjie
    Qiu, Dezhi
    Jin, Tong
    Wang, Gang
    He, Junping
    Liu, Ning
    FRONTIERS IN ONCOLOGY, 2023, 13
  • [9] A Pan-Cancer Analysis of the Oncogenic Role of Twinfilin Actin Binding Protein 1 in Human Tumors
    Huo, Gengwei
    Wang, Yali
    Chen, Jinliang
    Song, Ying
    Zhang, Cuicui
    Guo, Hua
    Zuo, Ran
    Zhu, Fuyi
    Cui, Jinfang
    Chen, Weidong
    Chen, Wenming
    Chen, Peng
    FRONTIERS IN ONCOLOGY, 2021, 11
  • [10] A pan-cancer analysis of the oncogenic role of Golgi transport 1B in human tumors
    Tian, Bo
    Pang, Yanan
    Gao, Ye
    Meng, Qianqian
    Xin, Lei
    Sun, Chang
    Tang, Xin
    Wang, Yilin
    Li, Zhaoshen
    Lin, Han
    Wang, Luowei
    JOURNAL OF TRANSLATIONAL INTERNAL MEDICINE, 2023, 11 (04) : 433 - 448