On the reliability of recombinase polymerase amplification - lateral flow assay using ITS rRNA gene primers and probe as a new detection method of the golden potato cyst nematode, Globodera rostochiensis
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作者:
Subbotin, Sergei A.
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Calif Dept Food & Agr, Plant Pest Diagnost Ctr, 3294 Meadowview Rd, Sacramento, CA 95832 USACalif Dept Food & Agr, Plant Pest Diagnost Ctr, 3294 Meadowview Rd, Sacramento, CA 95832 USA
Subbotin, Sergei A.
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[1] Calif Dept Food & Agr, Plant Pest Diagnost Ctr, 3294 Meadowview Rd, Sacramento, CA 95832 USA
. Recombinase polymerase amplification (RPA) is an isothermal in vitro nucleic acid amplification technique, which has been adopted as a novel molecular technology for simple, rapid, reliable, and low-resource diagnostics of nematodes and other damaging organisms. Recently, RPA integrated with lateral flow assay (LFA) using the ITS rRNA gene primers and probe was proposed by Wang et al. (2022) as a new detection method of Globodera rostochiensis. The reliability of any diagnostic method should be validated on a broad range of populations of different species from different geographical locations as well as on related taxa to avoid erroneous identification with false positive results. A total of 24 isolates of 13 cyst nematode species were used to validate the analytical specificity of the method mentioned above. The results of these tests showed that the ITS rRNA gene primers and probe did not give specific RPA-LFA detection for the golden potato cyst nematode and gave positive reactions not only with G. rostochiensis , but also with other Globodera parasitising solanaceous plants, G. artemisiae , and representatives of the genus Punctodera parasitising grasses.
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Russian Acad Sci, AN Bach Inst Biochem, Biotechnol Res Ctr, Moscow, RussiaRussian Acad Sci, AN Bach Inst Biochem, Biotechnol Res Ctr, Moscow, Russia
Ivanov, A. V.
Safenkova, I. V.
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Russian Acad Sci, AN Bach Inst Biochem, Biotechnol Res Ctr, Moscow, RussiaRussian Acad Sci, AN Bach Inst Biochem, Biotechnol Res Ctr, Moscow, Russia
Safenkova, I. V.
Zherdev, A. V.
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Russian Acad Sci, AN Bach Inst Biochem, Biotechnol Res Ctr, Moscow, RussiaRussian Acad Sci, AN Bach Inst Biochem, Biotechnol Res Ctr, Moscow, Russia
Zherdev, A. V.
Dzantiev, B. B.
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Russian Acad Sci, AN Bach Inst Biochem, Biotechnol Res Ctr, Moscow, RussiaRussian Acad Sci, AN Bach Inst Biochem, Biotechnol Res Ctr, Moscow, Russia
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Shanxi Med Univ, Dept Dermatol, Taiyuan Cent Hosp, Taiyuan, Shanxi, Peoples R China
Fourth Mil Med Univ, Air Force Med Ctr, Dept Dermatol, Beijing, Peoples R ChinaShanxi Med Univ, Dept Dermatol, Taiyuan Cent Hosp, Taiyuan, Shanxi, Peoples R China
Wang, Qian
Huang, Xin
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Fourth Mil Med Univ, Air Force Med Ctr, Dept Dermatol, Beijing, Peoples R China
Hebei Med Univ, Hosp 1, Dept Dermatol, Shijiazhuang, Hebei, Peoples R ChinaShanxi Med Univ, Dept Dermatol, Taiyuan Cent Hosp, Taiyuan, Shanxi, Peoples R China
Huang, Xin
Yan, Qiuhong
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Fourth Mil Med Univ, Air Force Med Ctr, Dept Dermatol, Beijing, Peoples R ChinaShanxi Med Univ, Dept Dermatol, Taiyuan Cent Hosp, Taiyuan, Shanxi, Peoples R China
Yan, Qiuhong
Chen, Ruikang
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Fourth Mil Med Univ, Air Force Med Ctr, Dept Dermatol, Beijing, Peoples R ChinaShanxi Med Univ, Dept Dermatol, Taiyuan Cent Hosp, Taiyuan, Shanxi, Peoples R China
Chen, Ruikang
Shao, Lifang
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Fourth Mil Med Univ, Air Force Med Ctr, Dept Dermatol, Beijing, Peoples R ChinaShanxi Med Univ, Dept Dermatol, Taiyuan Cent Hosp, Taiyuan, Shanxi, Peoples R China
Shao, Lifang
Li, Ruoyu
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Peking Univ, Res Ctr Med Mycol, Peking Univ Hosp 1, Dept Dermatol, Beijing, Peoples R ChinaShanxi Med Univ, Dept Dermatol, Taiyuan Cent Hosp, Taiyuan, Shanxi, Peoples R China
Li, Ruoyu
Song, Yinggai
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Peking Univ, Res Ctr Med Mycol, Peking Univ Hosp 1, Dept Dermatol, Beijing, Peoples R ChinaShanxi Med Univ, Dept Dermatol, Taiyuan Cent Hosp, Taiyuan, Shanxi, Peoples R China
Song, Yinggai
Yuan, Xiaoying
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Fourth Mil Med Univ, Air Force Med Ctr, Dept Dermatol, Beijing, Peoples R ChinaShanxi Med Univ, Dept Dermatol, Taiyuan Cent Hosp, Taiyuan, Shanxi, Peoples R China