Characteristic of molecular subtypes based on PANoptosis-related genes and experimental verification of hepatocellular carcinoma

被引:0
|
作者
Ren, Haitao [1 ]
Kang, Na [2 ]
Yin, Shuan [3 ]
Xu, Chen [4 ]
Qu, Tengfei [5 ]
Dai, Dongdong [5 ]
机构
[1] Qingdao Univ, Dept Intervent Med, Affiliated Hosp, Qingdao 266071, Shangdong, Peoples R China
[2] Qingdao Univ, Affiliated Hosp, Operating Room, Qingdao 266071, Shangdong, Peoples R China
[3] Qingdao Univ, Dept Pediat, Affiliated Hosp, Qingdao 266071, Shangdong, Peoples R China
[4] Qingdao Univ, Dept Infect Dis, Affiliated Hosp, Qingdao 266071, Shangdong, Peoples R China
[5] Qingdao Univ, Dept Hepatobiliary & Pancreat Surg, Affiliated Hosp, Qingdao 266071, Shangdong, Peoples R China
来源
AGING-US | 2023年 / 15卷 / 10期
基金
中国国家自然科学基金;
关键词
hepatocellular carcinoma; PANoptosis-related genes; risk model; immune infiltration; molecular subtypes; EOSINOPHILS; SURVIVAL;
D O I
暂无
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Hepatocellular carcinoma (HCC) is a type of liver cancer that originates from liver cells. It is one of the most common types of liver cancer and a leading cause of cancer-related death worldwide. Early detection and treatment can improve the HCC prognosis. Therefore, it is necessary to further improve HCC markers and risk stratification. PANoptosome is a cytoplasmic polymer protein complex that regulates a proinflammatory programmed cell death pathway called "PANoptosis". The role of PANoptosis in HCC remains unclear. In this study, the molecular changes of PANoptosis related genes (PAN-RGs) in HCC were systematically evaluated. We characterized the heterogeneity of HCC by using consensus clustering to identify two distinct subtypes. The two subtypes showed different survival rate, biological function, chemotherapy drug sensitivity and immune microenvironment. After identification of PAN-RG differential expression genes (DEGs), a prognostic model was established by Cox regression analysis using minimum absolute contraction and selection operator (LASSO), and its prognostic value was verified by Cox regression analysis, Kaplan-Meier curve and receiver operating characteristic (ROC) curve. Our own specimens were also used to further validate the prognostic significance and possible clinical value of the selected targets. Subsequently, we conducted a preliminary discussion on the reasons for the influence of the model on the prognosis through TME analysis, drug resistance analysis, TMB analysis and other studies. This study provides a new idea for individualized and precise treatment of HCC.
引用
收藏
页码:4159 / 4181
页数:23
相关论文
共 50 条
  • [1] Identification of molecular subtypes based on PANoptosis-related genes and construction of a signature for predicting the prognosis and response to immunotherapy response in hepatocellular carcinoma
    Zhu, Jinfeng
    Huang, Qian
    Peng, Xingyu
    Luo, Chen
    Liu, Zitao
    Liu, Dongdong
    Yuan, Huazhao
    Yuan, Rongfa
    Cheng, Xuexin
    FRONTIERS IN IMMUNOLOGY, 2023, 14
  • [2] PANoptosis-related genes in the prognosis and immune landscape of hepatocellular carcinoma
    Wang, Xiaowu
    Qu, Liangchen
    Wen, Zhikai
    Wu, Zhixuan
    Xue, Yuxiang
    Yang, Xuejia
    Yuan, Ziwei
    Guo, Yangyang
    Lin, Xingcheng
    IMMUNOLOGIC RESEARCH, 2025, 73 (01)
  • [3] Identification of PANoptosis-related subtypes, construction of a prognosis signature, and tumor microenvironment landscape of hepatocellular carcinoma using bioinformatic analysis and experimental verification
    Ouyang, Guoqing
    Li, Qiuyun
    Wei, Yangnian
    Dai, Wenbin
    Deng, Haojian
    Liu, Youli
    Li, Jiaguang
    Li, Mingjuan
    Luo, Shunwen
    Li, Shuang
    Liang, Yunying
    Pan, Guandong
    Yang, Jianqing
    Gan, Tao
    FRONTIERS IN IMMUNOLOGY, 2024, 15
  • [4] Molecular subtypes based on PANoptosis-related genes and tumor microenvironment infiltration characteristics in lower-grade glioma
    Abulaiti, Aimitaji
    Maimaiti, Aierpati
    Yiming, Nadire
    Fu, Qiang
    Li, Shaoshan
    Li, Yabin
    Wang, Yongxin
    Zhou, Qingjiu
    FUNCTIONAL & INTEGRATIVE GENOMICS, 2023, 23 (02)
  • [5] Molecular characterization of PANoptosis-related genes in chronic kidney disease
    Zhang, Wen-tao
    Ge, Hong-wei
    Wei, Yuan
    Gao, Jing-lin
    Tian, Fang
    Zhou, En-chao
    PLOS ONE, 2024, 19 (10):
  • [6] Identification and Analysis of PANoptosis-Related Genes in Sepsis-Induced Lung Injury by Bioinformatics and Experimental Verification
    Yang, Zhen
    Kao, Xingyu
    Huang, Na
    Yuan, Kang
    Chen, Jingli
    He, Mingfeng
    JOURNAL OF INFLAMMATION RESEARCH, 2024, 17 : 1941 - 1956
  • [7] Identification and validation of PANoptosis-related LncRNAs prognosis system in hepatocellular carcinoma
    Shu, Qi
    Zhu, Junfeng
    Mo, Jiaping
    Wei, Xiaoyan
    Zhu, Zhenjie
    Chen, Xiaojuan
    He, Fugen
    Zhong, Like
    SCIENTIFIC REPORTS, 2025, 15 (01):
  • [8] RETRACTED ARTICLE: Molecular subtypes based on PANoptosis-related genes and tumor microenvironment infiltration characteristics in lower-grade glioma
    Aimitaji Abulaiti
    Aierpati Maimaiti
    Nadire Yiming
    Qiang Fu
    Shaoshan Li
    Yabin Li
    Yongxin Wang
    Qingjiu Zhou
    Functional & Integrative Genomics, 2023, 23
  • [9] Molecular characterization analysis of PANoptosis-related genes in colorectal cancer based on bioinformatic analysis
    Zhang, Mengyang
    Li, Wen
    Zhao, Yubo
    Qi, Ling
    Xiao, Yonglong
    Liu, Donglian
    Peng, Tieli
    PLOS ONE, 2024, 19 (08):
  • [10] PANoptosis-related genes: Molecular insights into immune dysregulation in ulcerative colitis
    Ji, Yuxiao
    Li, Pengchong
    Ning, Tingting
    Yang, Deyi
    Shi, Haiyun
    Dong, Xueyu
    Zhu, Shengtao
    Li, Peng
    Zhang, Shutian
    JOURNAL OF GASTROENTEROLOGY AND HEPATOLOGY, 2025, 40 (01) : 177 - 191