CarbDisMut: database on neutral and disease-causing mutations in human carbohydrate-binding proteins

被引:0
|
作者
Shanmugam, N. R. Siva [1 ]
Kulandaisamy, A. [1 ,2 ]
Veluraja, K. [3 ]
Gromiha, M. Michael [1 ,4 ,5 ]
机构
[1] Indian Inst Technol Madras, Bhupat & Jyoti Mehta Sch Biosci, Dept Biotechnol, Chennai 600036, Tamil Nadu, India
[2] Boston Childrens Hosp, Basic & Translat Res, Dept Cardiol, Boston, MA 02115 USA
[3] PSN Coll Engn & Technol, Tirunelveli 627451, Tamil Nadu, India
[4] Tokyo Inst Technol, Inst Innovat Res, Dept Comp Sci, Tokyo Tech World Res Hub Initiat WRHI, 4259 Nagatsutacho,Midori Ku, Yokohama, Kanagawa 2268501, Japan
[5] Natl Univ Singapore, Dept Comp Sci, Singapore 117417, Singapore
关键词
carbohydrate-binding proteins; database; disease-causing; mutations; neutral; TRANSMEMBRANE;
D O I
10.1093/glycob/cwae011
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Protein-carbohydrate interactions are involved in several cellular and biological functions. Integrating structure and function of carbohydrate-binding proteins with disease-causing mutations help to understand the molecular basis of diseases. Although databases are available for protein-carbohydrate complexes based on structure, binding affinity and function, no specific database for mutations in human carbohydrate-binding proteins is reported in the literature. We have developed a novel database, CarbDisMut, a comprehensive integrated resource for disease-causing mutations with sequence and structural features. It has 1.17 million disease-associated mutations and 38,636 neutral mutations from 7,187 human carbohydrate-binding proteins. The database is freely available at https://web.iitm.ac.in/bioinfo2/carbdismut. The web-site is implemented using HTML, PHP and JavaScript and supports recent versions of all major browsers, such as Firefox, Chrome and Opera.
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页数:6
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