A high-quality draft genome sequence of Neonectria faginata, causative agent of beech bark disease of Fagus grandifolia

被引：1
|
作者：
Morrison, Eric W. [1 ]
Duong, Tuan A. [2 ]
Garnas, Jeff R. [1 ]
机构：
[1] Univ New Hampshire, Dept Nat Resources & Environm, Durham, NH 03824 USA
[2] Univ Pretoria, Forestry & Agr Biotechnol Inst, Dept Biochem Genet & Microbiol, Pretoria, South Africa
来源：
MICROBIOLOGY RESOURCE ANNOUNCEMENTS | 2024年 / 13卷 / 02期
基金：
芬兰科学院;
关键词：
fungi; neonectria; pathogenic fungi;
D O I：
10.1128/mra.01048-23
中图分类号：
Q93 [微生物学];
学科分类号：
071005 ; 100705 ;
摘要：
The draft genome of Neonectria faginata was sequenced with Oxford Nanopore and Illumina 250 bp paired-end sequencing technologies. The assembled genome was 42.9 Mb distributed over 24 contigs, with N50 of 4.4 Mb and 98.6% BUSCO completeness. This genome sequence will aid in understanding N. faginata population structure and ecology.
引用
收藏
页数：3
相关论文
共 50 条
  • [1] Comparative genome analyses suggest a hemibiotrophic lifestyle and virulence differences for the beech bark disease fungal pathogens Neonectria faginata and Neonectria coccinea
    Salgado-Salazar, Catalina
    Skaltsas, Demetra N.
    Phipps, Tunesha
    Castlebury, Lisa A.
    G3-GENES GENOMES GENETICS, 2021, 11 (04):
  • [2] High-Quality Draft Genome Sequence of the Causal Agent of the Current Panama Disease Epidemic
    Warmington, Rachel J.
    Kay, William
    Jeffries, Aaron
    ONeill, Paul
    Farbos, Audrey
    Moore, Karen
    Bebber, Daniel P.
    Studholme, David J.
    MICROBIOLOGY RESOURCE ANNOUNCEMENTS, 2019, 8 (36):
  • [3] Genome-wide association study identifies a major gene for beech bark disease resistance in American beech (Fagus grandifolia Ehrh.)
    Irina Ćalić
    Jennifer Koch
    David Carey
    Charles Addo-Quaye
    John E. Carlson
    David B. Neale
    BMC Genomics, 18
  • [4] Genome-wide association study identifies a major gene for beech bark disease resistance in American beech (Fagus grandifolia Ehrh.)
    Calic, Irina
    Koch, Jennifer
    Carey, David
    Addo-Quaye, Charles
    Carlson, John E.
    Neale, David B.
    BMC GENOMICS, 2017, 18
  • [5] High-Quality Draft Genome Sequence of Babesia divergens, the Etiological Agent of Cattle and Human Babesiosis
    Cuesta, Isabel
    Gonzalez, Luis M.
    Estrada, Karel
    Grande, Ricardo
    Zaballos, Angel
    Lobo, Cheryl A.
    Barrera, Jorge
    Sanchez-Flores, Alejandro
    Montero, Estrella
    GENOME ANNOUNCEMENTS, 2014, 2 (06)
  • [6] High-Quality Draft Genome Sequence of Sphaerisporangium cinnabarinum ATCC 31213
    Christensen, Line Friis Bakmann
    Otzen, Daniel
    Dueholm, Morten Simonsen
    GENOME ANNOUNCEMENTS, 2018, 6 (21)
  • [7] High-Quality Draft Genome Sequence of Pseudomonas wadenswilerensis CCOS 864(T)
    Rutz, Dominik
    Frasson, David
    Sievers, Martin
    Blom, Jochen
    Rezzonico, Fabio
    Pothier, Joel F.
    Smits, Theo H. M.
    MICROBIOLOGY RESOURCE ANNOUNCEMENTS, 2018, 7 (16):
  • [8] Draft Genome Sequence of Erwinia mallotivora BT-MARDI, Causative Agent of Papaya Dieback Disease
    Redzuan, R. Ahmad
    Abu Bakar, N.
    Rozano, L.
    Badrun, R.
    Amin, N. Mat
    Raih, M. F. Mohd
    GENOME ANNOUNCEMENTS, 2014, 2 (03)
  • [9] High-Quality Draft Genome Sequence of Fusarium oxysporum f. sp. cubense Strain 160527, a Causal Agent of Panama Disease
    Asai, Shuta
    Ayukawa, Yu
    Gan, Pamela
    Masuda, Sachiko
    Komatsu, Ken
    Shirasu, Ken
    Arie, Tsutomu
    MICROBIOLOGY RESOURCE ANNOUNCEMENTS, 2019, 8 (29):
  • [10] High-Quality Draft Genome Sequence of the Type Strain of Allorhizobium vitis, the Primary Causal Agent of Grapevine Crown Gall
    Gan, Han Ming
    Iee, Melvin Vun Jye
    Savka, Michael A.
    MICROBIOLOGY RESOURCE ANNOUNCEMENTS, 2018, 7 (09):
12345