Dynamic monitoring of an enzymatically driven dissipative toehold-mediated strand displacement reaction

被引:1
|
作者
Li, Shuang [1 ]
Zhao, Disong [1 ]
Yang, Fangfang [1 ]
Liu, Shufeng [1 ]
机构
[1] Yantai Univ, Coll Chem & Chem Engn, 30 Qingquan Rd, Yantai 264005, Peoples R China
基金
中国国家自然科学基金;
关键词
Substitution reactions;
D O I
10.1039/d3cc05061k
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
A general strategy to program self-resettable and dissipative toehold-mediated strand displacement reactions was proposed, using DNA strands as the fuel and lambda exonuclease as the fuel-consuming unit. This non-equilibrium system is reversible and temporally controllable. Furthermore, it can be well integrated into a DNA network to temporally control its cascade reaction or dynamic behaviour. A general strategy to program self-resettable and dissipative toehold-mediated strand displacement reactions by lambda exonuclease was proposed.
引用
收藏
页码:570 / 573
页数:4
相关论文
共 50 条
  • [1] Dissipative Control over the Toehold-Mediated DNA Strand Displacement Reaction
    Del Grosso, Erica
    Irmisch, Patrick
    Gentile, Serena
    Prins, Leonard J.
    Seidel, Ralf
    Ricci, Francesco
    ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2022, 61 (23)
  • [2] Modelling Toehold-Mediated RNA Strand Displacement
    Sulc, Petr
    Ouldridge, Thomas E.
    Romano, Flavio
    Doye, Jonathan P. K.
    Louis, Ard A.
    BIOPHYSICAL JOURNAL, 2015, 108 (05) : 1238 - 1247
  • [3] Twinkle-Catalyzed Toehold-Mediated DNA Strand Displacement Reaction
    Singh, Anupam
    Patel, Gayatri
    Patel, Smita S.
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2023, 145 (45) : 24522 - 24534
  • [4] Twinkle-Catalyzed Toehold-Mediated DNA Strand Displacement Reaction
    Singh, Anupam
    Patel, Gayatri
    Patel, Smita S.
    Journal of the American Chemical Society, 2023,
  • [5] Accelerating Toehold-Mediated DNA Strand Displacement Reaction using Polyquaternium
    Liu, Junlan
    Zhang, Qing
    CHEMISTRY-A EUROPEAN JOURNAL, 2025,
  • [6] Toehold-Mediated Strand Displacement in Random Sequence Pools
    Mayer, Thomas
    Oesinghaus, Lukas
    Simel, Friedrich C.
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2023, 145 (38) : 21143 - 21143
  • [7] On the biophysics and kinetics of toehold-mediated DNA strand displacement
    Srinivas, Niranjan
    Ouldridge, Thomas E.
    Sulc, Petr
    Schaeffer, Joseph M.
    Yurke, Bernard
    Louis, Ard A.
    Doye, Jonathan P. K.
    Winfree, Erik
    NUCLEIC ACIDS RESEARCH, 2013, 41 (22) : 10641 - 10658
  • [8] Information processing based on DNA toehold-mediated strand displacement (TMSD) reaction
    Luo, Tao
    Fan, Sisi
    Liu, Yan
    Song, Jie
    NANOSCALE, 2021, 13 (04) : 2100 - 2112
  • [9] Toehold-Mediated Strand Displacement in Random Sequence Pools
    Mayer, Thomas
    Oesinghaus, Lukas
    Simmel, Friedrich C.
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2023, 145 (01) : 634 - 644
  • [10] Controlling metabolic flux by toehold-mediated strand displacement
    Chen, Rebecca P.
    Hunt, Victoria M.
    Mitkas, Alexander A.
    Siu, Ka-Hei
    Chen, Wilfred
    CURRENT OPINION IN BIOTECHNOLOGY, 2020, 66 : 150 - 157