Vallitalea longa sp. nov., an anaerobic bacterium isolated from marine sediment

被引:0
|
作者
Hirano, Shiori [1 ]
Terahara, Takeshi [1 ]
Mori, Koji [2 ]
Hamada, Moriyuki [2 ]
Matsumoto, Ryo [3 ]
Kobayashi, Takeshi [1 ]
机构
[1] Tokyo Univ Marine Sci & Technol, Grad Sch Marine Sci & Technol, Minato Ku, 4-5-7 Konan, Tokyo 1088477, Japan
[2] Natl Inst Technol & Evaluat NITE, NITE Biol Resource Ctr NBRC, 2-5-8 Kazusakamatari, Kisarazu, Chiba 2920818, Japan
[3] Meiji Univ, Gas Hydrate Res Lab, Tama Ku, 1-1-1 Higashi Mita, Kawasaki, Kanagawa 2148571, Japan
关键词
Vallitalea; marine sediment; anaerobic bacterium; GEN; NOV; CLASSIFICATION;
D O I
10.1099/ijsem.0.005882
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A novel bacterium, strain SH18- 1T, was isolated from marine sediment collected near Sado Island in the Sea of Japan. This strain was strictly anaerobic, Gram- stain-negative, non- spore-forming, rod-shaped, motile, and mesophilic. It grew at 15-40 & DEG;C (optimum, 30-35 & DEG;C), at a NaCl concentration of 0.2-5.0 % (w/v; optimum, 1.5-2.5 %), and at pH 5.5-8.5 (optimum, pH 7.0). Results of 16S rRNA gene phylogenetic analysis showed a similarity value of 97.49 % between strain SH18- 1T and Vallitalea guaymasen-sis Ra1766G1T, which was the most closely related species. The genome size of strain SH18- 1T was 5.71 Mb and its G+C content was 30.2 mol%. Genome sequence analyses for comparison between strain SH18- 1T and V. guaymasensis Ra1766G1T showed values lower than the threshold for species demarcation determined using the Genome- to-Genome Distance Calculator and the Average Nucleotide Identity Calculator. Elemental sulphur, sulphate, thiosulphate, sulphite, fumarate, nitrate, and nitrite were not used as terminal electron acceptors. The major fatty acids in strain SH18- 1T were iso-C15:0, anteiso-C15:0, and C16:0, and the detected polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphoglycolipid, glycolipid, three unidentified phos-pholipids, and one unidentified polar lipid. From these results, strain SH18- 1T (=NBRC 115488T=DSM 114058T) is suggested to represent a novel species of the genus Vallitalea and the name Vallitalea longa sp. nov. is proposed.
引用
收藏
页数:7
相关论文
共 50 条
  • [1] Vallitalea guaymasensis gen. nov., sp nov., isolated from marine sediment
    Lakhal, Raja
    Pradel, Nathalie
    Postec, Anne
    Hamdi, Moktar
    Ollivier, Bernard
    Godfroy, Anne
    Fardeaul, Marie-Laure
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2013, 63 : 3019 - 3023
  • [2] Paenibacillus marinisediminis sp. nov., a bacterium isolated from marine sediment
    Hae-Won Lee
    Seong Woon Roh
    Kyung June Yim
    Na-Ri Shin
    Jina Lee
    Tae Woong Whon
    Joon Yong Kim
    Dong-Wook Hyun
    Daekyung Kim
    Jin-Woo Bae
    [J]. Journal of Microbiology, 2013, 51 : 312 - 317
  • [3] Vallitalea okinawensis sp. nov., isolated from Okinawa Trough sediment and emended description of the genus Vallitalea
    Sun, Yu-Tong
    Zhou, Nan
    Wang, Bao-Jun
    Liu, Xiao-Dong
    Jiang, Cheng-Ying
    Ge, Xin
    Liu, Shuang-Jiang
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2019, 69 (02) : 404 - 410
  • [4] Roseovarius arcticus sp. nov., a bacterium isolated from Arctic marine sediment
    Lu, Lu
    Zhang, Yumin
    Peng, Xiaoya
    Liu, Jia
    Qin, Kun
    Peng, Fang
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2020, 70 (03) : 2072 - 2078
  • [5] Metabacillus sediminilitoris sp. nov., a marine bacterium isolated from a tidal sediment
    Maou, Haiyan
    Wei, Yuli
    Gao, Yuxin
    Pei, Jiahao
    Zhang, Yan
    Fang, Jiasong
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2020, 70 (10) : 5211 - 5216
  • [6] Draconibacterium halophilum sp. nov., A Halophilic Bacterium Isolated from Marine Sediment
    Kim, Minji
    Lee, Ki-Eun
    Cha, In-Tae
    Park, Soo-Je
    [J]. CURRENT MICROBIOLOGY, 2021, 78 (06) : 2440 - 2446
  • [7] Thalassotalea mangrovi sp. nov., a bacterium isolated from marine mangrove sediment
    Zheng, Sisi
    Zhang, Danyang
    Gui, Jiali
    Wang, Jiangning
    Zhu, Xiaoying
    Lai, Qiliang
    Wang, Wenqing
    Xu, Hong
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2019, 69 (11) : 3644 - 3649
  • [8] Rheinheimera lutimaris sp. nov., a marine bacterium isolated from coastal sediment
    Yu, Qunfang
    Qi, Yanxiang
    Pu, Jinji
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2021, 71 (12)
  • [9] Rheinheimera sediminis sp. nov., a marine bacterium isolated from coastal sediment
    Yu, Qunfang
    Qi, Yanxiang
    Zhang, He
    Pu, Jinji
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2020, 70 (02) : 1282 - 1287
  • [10] Ketobacter nezhaii sp. nov., a marine bacterium isolated from coastal sediment
    Li, Jianyang
    Qi, Mingming
    Lai, Qiliang
    Liu, Xianhua
    Shao, Zongze
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2020, 70 (09) : 4960 - 4965