Lung CT harmonization of paired reconstruction kernel images using generative adversarial networks

被引:2
|
作者
Krishnan, Aravind R. [1 ,9 ]
Xu, Kaiwen [2 ]
Li, Thomas Z. [3 ]
Remedios, Lucas W. [2 ]
Sandler, Kim L. [4 ]
Maldonado, Fabien [5 ,6 ]
Landman, Bennett A. [1 ,2 ,3 ,7 ,8 ]
机构
[1] Vanderbilt Univ, Dept Elect & Comp Engn, Nashville, TN USA
[2] Vanderbilt Univ, Dept Comp Sci, Nashville, TN USA
[3] Vanderbilt Univ, Dept Biomed Engn, Nashville, TN USA
[4] Vanderbilt Univ, Med Ctr, Dept Radiol, Nashville, TN USA
[5] Vanderbilt Univ, Med Ctr, Dept Med, Nashville, TN USA
[6] Vanderbilt Univ, Med Ctr, Dept Thorac Surg, Nashville, TN USA
[7] Vanderbilt Univ, Med Ctr, Dept Radiol & Radiol Sci, Nashville, TN USA
[8] Vanderbilt Univ, Med Ctr, Inst Imaging Sci, Nashville, TN USA
[9] Vanderbilt Univ, Dept Elect & Comp Engn, Nashville, TN 37235 USA
基金
美国国家科学基金会;
关键词
CT kernel harmonization; deep learning; generative adversarial networks; lung cancer; EMPHYSEMA; VALIDATION; CONVERSION;
D O I
10.1002/mp.17028
中图分类号
R8 [特种医学]; R445 [影像诊断学];
学科分类号
1002 ; 100207 ; 1009 ;
摘要
Background: The kernel used in CT image reconstruction is an important factor that determines the texture of the CT image. Consistency of reconstruction kernel choice is important for quantitative CT-based assessment as kernel differences can lead to substantial shifts in measurements unrelated to underlying anatomical structures. Purpose: In this study, we investigate kernel harmonization in a multi-vendor low-dose CT lung cancer screening cohort and evaluate our approach's validity in quantitative CT-based assessments. Methods: Using the National Lung Screening Trial, we identified CT scan pairs of the same sessions with one reconstructed from a soft tissue kernel and one from a hard kernel. In total, 1000 pairs of five different paired kernel types (200 each) were identified. We adopt the pix2pix architecture to train models for kernel conversion. Each model was trained on 100 pairs and evaluated on 100 withheld pairs. A total of 10 models were implemented. We evaluated the efficacy of kernel conversion based on image similarity metrics including root mean squared error (RMSE), peak signal-to-noise ratio (PSNR), and structural similarity index measure (SSIM) as well as the capability of the models to reduce measurement shifts in quantitative emphysema and body composition measurements. Additionally, we study the reproducibility of standard radiomic features for all kernel pairs before and after harmonization. Results: Our approach effectively converts CT images from one kernel to another in all paired kernel types, as indicated by the reduction in RMSE (p < 0.05) and an increase in the PSNR (p < 0.05) and SSIM (p < 0.05) for both directions of conversion for all pair types. In addition, there is an increase in the agreement for percent emphysema, skeletal muscle area, and subcutaneous adipose tissue (SAT) area for both directions of conversion. Furthermore, radiomic features were reproducible when compared with the ground truth features. Conclusions: Kernel conversion using deep learning reduces measurement variation in percent emphysema, muscle area, and SAT area.
引用
收藏
页码:5510 / 5523
页数:14
相关论文
共 50 条
  • [1] Prediction of FDG uptake in Lung Tumors from CT Images Using Generative Adversarial Networks
    Liebgott, Annika
    Hindere, Darius
    Armanious, Karim
    Bartler, Alexander
    Nikolaou, Konstantin
    Gatidis, Sergios
    Yang, Bin
    2019 27TH EUROPEAN SIGNAL PROCESSING CONFERENCE (EUSIPCO), 2019,
  • [2] Multicenter PET image harmonization using generative adversarial networks
    Haberl, David
    Spielvogel, Clemens P.
    Jiang, Zewen
    Orlhac, Fanny
    Iommi, David
    Carrio, Ignasi
    Buvat, Irene
    Haug, Alexander R.
    Papp, Laszlo
    EUROPEAN JOURNAL OF NUCLEAR MEDICINE AND MOLECULAR IMAGING, 2024, 51 (09) : 2532 - 2546
  • [3] Heightmap Reconstruction of Macula on Color Fundus Images Using Conditional Generative Adversarial Networks
    Tahghighi, Peyman
    Zoroofi, Reza A.
    Safi, Sare
    Ramezani, Alireza
    Ahmadieh, Hamid
    2021 26TH INTERNATIONAL COMPUTER CONFERENCE, COMPUTER SOCIETY OF IRAN (CSICC), 2021,
  • [4] Estimating CT from MR Abdominal Images Using Novel Generative Adversarial Networks
    Pengjiang Qian
    Ke Xu
    Tingyu Wang
    Qiankun Zheng
    Huan Yang
    Atallah Baydoun
    Junqing Zhu
    Bryan Traughber
    Raymond F. Muzic
    Journal of Grid Computing, 2020, 18 : 211 - 226
  • [5] Estimating CT from MR Abdominal Images Using Novel Generative Adversarial Networks
    Qian, Pengjiang
    Xu, Ke
    Wang, Tingyu
    Zheng, Qiankun
    Yang, Huan
    Baydoun, Atallah
    Zhu, Junqing
    Traughber, Bryan
    Muzic, Raymond F., Jr.
    JOURNAL OF GRID COMPUTING, 2020, 18 (02) : 211 - 226
  • [6] Learning to Distort Images Using Generative Adversarial Networks
    Chen, Li-Heng
    Bampis, Christos G.
    Li, Zhi
    Bovik, Alan C.
    IEEE SIGNAL PROCESSING LETTERS, 2020, 27 : 2144 - 2148
  • [7] Generative Image Inpainting for Retinal Images using Generative Adversarial Networks
    Magister, Lucie Charlotte
    Arandjelovic, Ognjen
    2021 43RD ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE & BIOLOGY SOCIETY (EMBC), 2021, : 2835 - 2838
  • [8] Anonymizing Personal Images Using Generative Adversarial Networks
    Piacentino, Esteban
    Angulo, Cecilio
    BIOINFORMATICS AND BIOMEDICAL ENGINEERING (IWBBIO 2020), 2020, 12108 : 395 - 405
  • [9] Compression and reconstruction of flotation foam images based on generative adversarial networks
    Jia, Runda
    Yan, Yi
    Lang, Du
    He, Dakuo
    Li, Kang
    MINERALS ENGINEERING, 2023, 202
  • [10] Sparse-View CT Reconstruction via Generative Adversarial Networks
    Zhao, Zhongwei
    Sun, Yuewen
    Cong, Peng
    2018 IEEE NUCLEAR SCIENCE SYMPOSIUM AND MEDICAL IMAGING CONFERENCE PROCEEDINGS (NSS/MIC), 2018,