Natural pyrite was employed to activate peroxymonosulfate (PMS) to degrade 2,4,6-trichlorophenol (2,4,6-TCP) in water. The pyrite was proven to be the FeS2 crystal and with the mesopore structure. The optimized system with a ratio of pyrite to PMS at 8:1 showed the highest performance, and more than 99.8% of 2,4,6-TCP was removed by the pyrite/PMS system. Additionally, the removal efficiency of 2,4,6-TCP under various water matrix factors was comprehensively evaluated. Sulfate radical (SO4 & BULL;) and hydroxyl radical (& BULL;OH) were identified as the major species that dominated the efficiency of the pyrite/PMS system for organic compound degradation. The static content of SO4 & BULL; was calculated to be 6.84 x 10 13 mol/L, which was 4.36 times that of & BULL;OH. The SO4 & BULL; and & BULL;OH could powerfully induce the degradation of 2,4,6-TCP by attacking the Cl in the structure with high electron density. According to the Fukui functions calculation, O(9), C(4) and C(1) with higher fr values were more readily to undergo electrophilic reaction, and the three Cl with higher fr0 values in the structure were easily dechlorinated. The dechlorination, radical substitution, hydroxylation and ring-opening processes caused the degradation of 2,4,6-TCP. Meantime, the dechlorination process significantly decreased the toxicity of the in-termediate products. This study proposed an effective and safe process for 2,4,6-TCP degradation.