Identification of cuproptosis-related lncRNAs with the significance in prognosis and immunotherapy of oral squamous cell carcinoma

被引:2
|
作者
Gong, Han [1 ,2 ,3 ]
Liu, Zhaolong [4 ,5 ]
Yuan, Chunhui [1 ]
Luo, Ying [4 ,5 ]
Chen, Yuhan [4 ,5 ]
Zhang, Junyi [4 ,5 ]
Cui, Yiteng [4 ,5 ]
Zeng, Bin [6 ]
Liu, Jing [2 ,3 ]
Li, Hui [1 ,2 ,3 ,7 ,8 ,10 ]
Deng, Zhiyuan [1 ,4 ,5 ,6 ,9 ]
机构
[1] Cent South Univ, Xiangya Hosp, Hunan Engn Res Ctr Skin Hlth & Dis, Dept Dermatol,Hunan Key Lab Skin Canc & Psoriasis, Changsha 410008, Hunan, Peoples R China
[2] Cent South Univ, Mol Biol Res Ctr, Sch Life Sci, Changsha, Hunan, Peoples R China
[3] Cent South Univ, Ctr Med Genet, Sch Life Sci, Changsha, Hunan, Peoples R China
[4] Cent South Univ, Xiangya Stomatol Hosp, Hunan Key Lab Oral Hlth Res, Dept Oral & Maxillofacial Surg, Changsha, Peoples R China
[5] Cent South Univ, Xiangya Sch Stomatol, 72 Xiangya Rd, Changsha 410008, Hunan, Peoples R China
[6] Changsha Med Univ, Sch Stontatol, Changsha, Hunan, Peoples R China
[7] Cent South Univ, Natl Engn Res Ctr Personalized Diagnost & Therapeu, Changsha 410008, Hunan, Peoples R China
[8] Cent South Univ, Xiangya Hosp, Natl Clin Res Ctr Geriatr Disorders, Changsha 410008, Hunan, Peoples R China
[9] Cent South Univ, Xiangya Stomatol Hosp, Hunan Key Lab Oral Hlth Res, 72 Xiangya Rd, Changsha 410008, Hunan, Peoples R China
[10] Hunan Univ, Mol Sci & Biomed Lab, Lushan South Rd, Changsha 410082, Hunan, Peoples R China
基金
中国国家自然科学基金;
关键词
Cuproptosis; lncRNA; Tumor microenvironment; Oral squamous cell carcinoma; Immunotherapy; Prognosis; LONG NONCODING RNA; CANCER; HEAD; RESISTANCE; SURVIVAL;
D O I
10.1016/j.compbiomed.2024.108198
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Cuproptosis, a recently characterized programmed cell death mechanism, has emerged as a potential contributor to tumorigenesis, metastasis, and immune modulation. Long non-coding RNAs (lncRNAs) have demonstrated diverse regulatory roles in cancer and hold promise as biomarkers. However, the involvement and prognostic significance of cuproptosis-related lncRNAs (CRLs) in oral squamous cell carcinoma (OSCC) remain poorly understood. Based on TCGA-OSCC data, we integrated single-sample gene set enrichment analysis (ssGSEA), the LASSO algorithm, and the tumor immune dysfunction and exclusion (TIDE) algorithm. We identified 11 CRLs through differential expression, Spearman correlation, and univariate Cox regression analyses. Two distinct CRLrelated subtypes were unveiled, delineating divergent survival patterns, tumor microenvironments (TME), and mutation profiles. A robust CRL-based signature (including AC107027.3, AC008011.2, MYOSLID, AC005785.1, AC019080.5, AC020558.2, AC025265.1, FAM27E3, and LINC02367) prognosticated OSCC outcomes, immunotherapy responses, and anti-tumor strategies. Superior predictive power compared to other lncRNA models was demonstrated. Functional assessments confirmed the influence of FAM27E3, LINC02367, and MYOSLID knockdown on OSCC cell behaviors. Remarkably, the CRLs-based signature maintained stability across OSCC patient subgroups, underscoring its clinical potential for survival prediction. This study elucidates CRLs' roles in TME of OSCC and establishes a potential signature for precision therapy.
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页数:15
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