Hs1Cas12a and Ev1Cas12a confer efficient genome editing in plants

被引:8
|
作者
Li, Gen [1 ]
Zhang, Yingxiao [1 ]
Dailey, Micah [1 ]
Qi, Yiping [1 ,2 ]
机构
[1] Univ Maryland, Dept Plant Sci & Landscape Architecture, College Pk, MD 20742 USA
[2] Univ Maryland, Inst Biosci & Biotechnol Res, Rockville, MD 20850 USA
来源
关键词
Cas12a orthologs; Ev1Cas12a; Hs1Cas12a; genome editing; low temperature tolerance; rice; tomato; poplar; CPF1;
D O I
10.3389/fgeed.2023.1251903
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Cas12a, also known as Cpf1, is a highly versatile CRISPR-Cas enzyme that has been widely used in genome editing. Unlike its well-known counterpart, Cas9, Cas12a has unique features that make it a highly efficient genome editing tool at AT-rich genomic regions. To enrich the CRISPR-Cas12a plant genome editing toolbox, we explored 17 novel Cas12a orthologs for their genome editing capabilities in plants. Out of them, Ev1Cas12a and Hs1Cas12a showed efficient multiplexed genome editing in rice and tomato protoplasts. Notably, Hs1Cas12a exhibited greater tolerance to lower temperatures. Moreover, Hs1Cas12a generated up to 87.5% biallelic editing in rice T0 plants. Both Ev1Cas12a and Hs1Cas12a achieved effective editing in poplar T0 plants, with up to 100% of plants edited, albeit with high chimerism. Taken together, the efficient genome editing demonstrated by Ev1Cas12a and Hs1Cas12a in both monocot and dicot plants highlights their potential as promising genome editing tools in plant species and beyond.
引用
收藏
页数:10
相关论文
共 50 条
  • [1] CRISPR-Cas12a base editors confer efficient multiplexed genome editing in rice
    Cheng, Yanhao
    Zhang, Yingxiao
    Li, Gen
    Fang, Hong
    Sretenovic, Simon
    Fan, Avery
    Li, Jiang
    Xu, Jianping
    Que, Qiudeng
    Qi, Yiping
    PLANT COMMUNICATIONS, 2023, 4 (04)
  • [2] CRISPR-Cas12a Base Editors Confer Efficient Multiplexed Genome Editing in Rice.
    Cheng, Yanhao
    Zhang, Yingxiao
    Li, Gen
    Fang, Hong
    Sretenovic, Simon
    Fan, Avery
    Li, Jiang
    Xu, Jianping
    Que, Qiudeng
    Qi, Yiping
    IN VITRO CELLULAR & DEVELOPMENTAL BIOLOGY-ANIMAL, 2023, 59 : S140 - S140
  • [3] An engineered Cas12i nuclease that is an efficient genome editing tool in animals and plants
    Duan, Zhiqiang
    Liang, Yafeng
    Sun, Jialei
    Zheng, Hongjin
    Lin, Tong
    Luo, Pengyu
    Wang, Mengge
    Liu, Ruiheng
    Chen, Ying
    Guo, Shuhua
    Jia, Nannan
    Xie, Hongtao
    Zhou, Meili
    Xia, Minghui
    Zhao, Kaijun
    Wang, Shuhui
    Liu, Na
    Jia, Yongling
    Si, Wei
    Chen, Qitong
    Hong, Yechun
    Tian, Ruilin
    Zhu, Jian-Kang
    INNOVATION, 2024, 5 (02):
  • [4] Efficient Genome Editing in Populus Using CRISPR/Cas12a
    An, Yi
    Geng, Ya
    Yao, Junguang
    Fu, Chunxiang
    Lu, Mengzhu
    Wang, Chun
    Du, Juan
    FRONTIERS IN PLANT SCIENCE, 2020, 11
  • [5] Multiplexed CRISPR-Cas9 and CRISPR-Cas12a Systems for Genome Editing in Plants
    Li, Gen
    Qi, Yiping
    IN VITRO CELLULAR & DEVELOPMENTAL BIOLOGY-ANIMAL, 2023, 59 : S67 - S67
  • [6] Geminiviral-induced genome editing using miniature CRISPR/Cas12j (CasΦ) and Cas12f variants in plants
    Zheng Gong
    Dominic Andrew Previtera
    Yijie Wang
    José Ramón Botella
    Plant Cell Reports, 2024, 43
  • [7] Geminiviral-induced genome editing using miniature CRISPR/Cas12j (CasΦ) and Cas12f variants in plants
    Gong, Zheng
    Previtera, Dominic Andrew
    Wang, Yijie
    Botella, Jose Ramon
    PLANT CELL REPORTS, 2024, 43 (03)
  • [8] Engineering miniature CRISPR-Cas Un1Cas12f1 for efficient base editing
    Hu, Yueer
    Han, Linxiao
    Mo, Qiqin
    Du, Zengming
    Jiang, Wei
    Wu, Xia
    Zheng, Jing
    Xiao, Xiao
    Sun, Yadong
    Ma, Hanhui
    MOLECULAR THERAPY NUCLEIC ACIDS, 2024, 35 (02):
  • [9] Efficient genome editing for Pseudomonas aeruginosa using CRISPR-Cas12a
    Lin, Zhanglin
    Li, Huanhuan
    He, Lan
    Jing, Yanyun
    Pistolozzi, Marco
    Wang, Tingting
    Ye, Yanrui
    GENE, 2021, 790
  • [10] Efficient genome editing by CRISPR-Mb3Cas12a in mice
    Wang, Zhuqing
    Wang, Yue
    Wang, Shawn
    Gorzalski, Andrew J.
    McSwiggin, Hayden
    Yu, Tian
    Castaneda-Garcia, Kimberly
    Prince, Brian
    Wang, Hetan
    Zheng, Huili
    Yan, Wei
    JOURNAL OF CELL SCIENCE, 2020, 133 (09)