Audio-based AI classifiers show no evidence of improved COVID-19 screening over simple symptoms checkers

被引:5
|
作者
Coppock, Harry [1 ,2 ]
Nicholson, George [1 ,3 ,4 ]
Kiskin, Ivan [1 ,3 ,5 ]
Koutra, Vasiliki [1 ,6 ]
Baker, Kieran [1 ,6 ]
Budd, Jobie [7 ,8 ]
Payne, Richard [9 ]
Karoune, Emma [1 ]
Hurley, David [9 ]
Titcomb, Alexander [9 ]
Egglestone, Sabrina [9 ]
Tendero Canadas, Ana [9 ,10 ]
Butler, Lorraine [9 ]
Jersakova, Radka [1 ]
Mellor, Jonathon [9 ]
Patel, Selina [9 ,11 ]
Thornley, Tracey [12 ]
Diggle, Peter [13 ]
Richardson, Sylvia [1 ]
Packham, Josef [9 ]
Schuller, Bjoern W. [1 ,2 ,14 ]
Pigoli, Davide [1 ,6 ]
Gilmour, Steven [1 ,6 ]
Roberts, Stephen [1 ,3 ]
Holmes, Chris [1 ,3 ]
机构
[1] Alan Turing Inst, London, England
[2] Imperial Coll London, London, England
[3] Univ Oxford, Oxford, England
[4] NIHR Oxford Biomed Res Ctr, Oxford, England
[5] Univ Surrey, Surrey Inst People Centred AI, Guildford, England
[6] Kings Coll London, London, England
[7] UCL, Div Med, London, England
[8] UCL, London Ctr Nanotechnol, London, England
[9] UK Hlth Secur Agcy, London, England
[10] Univ Brighton, Sch Appl Sci, Brighton, England
[11] UCL, Inst Hlth Informat, London, England
[12] Univ Nottingham, Nottingham, England
[13] Univ Lancaster, Lancaster, England
[14] Univ Augsburg, Augsburg, Germany
基金
英国经济与社会研究理事会; 英国工程与自然科学研究理事会;
关键词
AUGMENTATION; COUGH; MODEL;
D O I
10.1038/s42256-023-00773-8
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
Recent work has reported that respiratory audio-trained AI classifiers can accurately predict SARS-CoV-2 infection status. However, it has not yet been determined whether such model performance is driven by latent audio biomarkers with true causal links to SARS-CoV-2 infection or by confounding effects, such as recruitment bias, present in observational studies. Here we undertake a large-scale study of audio-based AI classifiers as part of the UK government's pandemic response. We collect a dataset of audio recordings from 67,842 individuals, with linked metadata, of whom 23,514 had positive polymerase chain reaction tests for SARS-CoV-2. In an unadjusted analysis, similar to that in previous works, AI classifiers predict SARS-CoV-2 infection status with high accuracy (ROC-AUC = 0.846 [0.838-0.854]). However, after matching on measured confounders, such as self-reported symptoms, performance is much weaker (ROC-AUC = 0.619 [0.594-0.644]). Upon quantifying the utility of audio-based classifiers in practical settings, we find them to be outperformed by predictions on the basis of user-reported symptoms. We make best-practice recommendations for handling recruitment bias, and for assessing audio-based classifiers by their utility in relevant practical settings. Our work provides insights into the value of AI audio analysis and the importance of study design and treatment of confounders in AI-enabled diagnostics. AI-enabled diagnostic applications in healthcare can be powerful, but study design is very important to avoid subtle issues of bias in the dataset and evaluation. Coppock et al. demonstrate how an AI-based classifier for diagnosing SARS-Cov-2 infection from audio recordings can seem to make predictions with high accuracy but shows much lower performance after taking into account confounders, providing insights in study design and replicability in AI-based audio analysis.
引用
收藏
页码:229 / 242
页数:25
相关论文
共 38 条
  • [1] Audio-based AI classifiers show no evidence of improved COVID-19 screening over simple symptoms checkers
    Harry Coppock
    George Nicholson
    Ivan Kiskin
    Vasiliki Koutra
    Kieran Baker
    Jobie Budd
    Richard Payne
    Emma Karoune
    David Hurley
    Alexander Titcomb
    Sabrina Egglestone
    Ana Tendero Cañadas
    Lorraine Butler
    Radka Jersakova
    Jonathon Mellor
    Selina Patel
    Tracey Thornley
    Peter Diggle
    Sylvia Richardson
    Josef Packham
    Björn W. Schuller
    Davide Pigoli
    Steven Gilmour
    Stephen Roberts
    Chris Holmes
    Nature Machine Intelligence, 2024, 6 : 229 - 242
  • [2] Audio-Based Deep Learning Frameworks for Detecting COVID-19
    Ngo, Dat
    Pham, Lam
    Hoang, Truong
    Kolozali, Sefki
    Jarchi, Delaram
    2022 30TH EUROPEAN SIGNAL PROCESSING CONFERENCE (EUSIPCO 2022), 2022, : 1233 - 1237
  • [3] Audio-based COVID-19 diagnosis using separable transformer
    Kang, Seungtae
    Jang, Gil-Jin
    JOURNAL OF THE ACOUSTICAL SOCIETY OF KOREA, 2023, 42 (03): : 221 - 225
  • [4] Sounds of COVID-19: exploring realistic performance of audio-based digital testing
    Han, Jing
    Xia, Tong
    Spathis, Dimitris
    Bondareva, Erika
    Brown, Chloe
    Chauhan, Jagmohan
    Dang, Ting
    Grammenos, Andreas
    Hasthanasombat, Apinan
    Floto, Andres
    Cicuta, Pietro
    Mascolo, Cecilia
    NPJ DIGITAL MEDICINE, 2022, 5 (01)
  • [5] Sounds of COVID-19: exploring realistic performance of audio-based digital testing
    Jing Han
    Tong Xia
    Dimitris Spathis
    Erika Bondareva
    Chloë Brown
    Jagmohan Chauhan
    Ting Dang
    Andreas Grammenos
    Apinan Hasthanasombat
    Andres Floto
    Pietro Cicuta
    Cecilia Mascolo
    npj Digital Medicine, 5
  • [6] A machine learning COVID-19 mass screening based on symptoms and a simple olfactory test
    Azeli, Youcef
    Fernandez, Alberto
    Capriles, Federico
    Rojewski, Wojciech
    Lopez-Madrid, Vanesa
    Sabate-Lissner, David
    Serrano, Rosa Maria
    Rey-Renones, Cristina
    Civit, Marta
    Casellas, Josefina
    El Ouahabi-El Ouahabi, Abdelghani
    Foglia-Fernandez, Maria
    Sarra, Salvador
    Llobet, Eduard
    SCIENTIFIC REPORTS, 2022, 12 (01)
  • [7] A machine learning COVID-19 mass screening based on symptoms and a simple olfactory test
    Youcef Azeli
    Alberto Fernández
    Federico Capriles
    Wojciech Rojewski
    Vanesa Lopez-Madrid
    David Sabaté-Lissner
    Rosa Maria Serrano
    Cristina Rey-Reñones
    Marta Civit
    Josefina Casellas
    Abdelghani El Ouahabi-El Ouahabi
    Maria Foglia-Fernández
    Salvador Sarrá
    Eduard Llobet
    Scientific Reports, 12
  • [8] MULTI-MODAL APPROACHES FOR IMPROVING THE ROBUSTNESS OF AUDIO-BASED COVID-19 DETECTION SYSTEMS
    Grant, Drew
    Hahn, Helena
    Eisape, Adebayo
    Rennoll, Valerie
    West, James
    2024 IEEE INTERNATIONAL CONFERENCE ON ACOUSTICS, SPEECH, AND SIGNAL PROCESSING WORKSHOPS, ICASSPW 2024, 2024, : 144 - 148
  • [9] Exploring Semi-supervised Learning for Audio-based COVID-19 Detection using FixMatch
    Dang, Ting
    Quinnell, Thomas
    Mascolo, Cecilia
    INTERSPEECH 2022, 2022, : 2468 - 2472
  • [10] AI-Based human audio processing for COVID-19: A comprehensive overview
    Deshpande, Gauri
    Batliner, Anton
    Schuller, Bjoern W.
    PATTERN RECOGNITION, 2022, 122