Bonded cumomer analysis of tumor metabolism based on 13C magnetic resonance spectroscopy

被引:2
|
作者
Shestov, Alexander A. [1 ]
Nath, Kavindra [1 ]
Nelson, David S. [1 ]
Wasik, Mariusz A. [2 ]
Glickson, Jerry D. [1 ,3 ]
机构
[1] Univ Penn, Perelman Sch Med, Dept Radiol, Philadelphia, PA 19104 USA
[2] Fox Chase Canc Ctr, Dept Pathol, Philadelphia, PA 19111 USA
[3] Univ Penn, Perelman Sch Med, Dept Biochem & Biophys, Philadelphia, PA 19104 USA
基金
美国国家卫生研究院;
关键词
cumomer; flux analysis; isotopomer; isotopomer control analysis; metabolic network; multiplet structure; sensitivity analysis; NMR-SPECTROSCOPY; IN-VIVO; ACID CYCLE; BRAIN; GLUCONEOGENESIS; REDISTRIBUTION; GLYCOLYSIS; CELLS; FLUX;
D O I
10.1002/nbm.4716
中图分类号
Q6 [生物物理学];
学科分类号
071011 ;
摘要
Bonded cumomers are sets of isotopomers of C-13-labeled metabolites containing a particular sequence of contiguously or singly labeled carbon atoms. Only these isotopomers contribute to multiplet structure in the C-13 NMR spectrum. We discuss the application of this technique to the study of quantitative tumor metabolism, bioenergetics, and the Warburg effect. The advantages and sensitivity of bonded cumomer analysis over positional enrichment analysis are discussed. When sensitivity requirements are met, bonded cumomer analysis enables the extraction of fluxes through specific metabolic pathways with higher precision. In conjunction with isotopomer control analysis, we evaluate the sensitivity of experimentally measurable metabolite multiplets to determine the robustness of flux analysis in C-13 spectra of tumors. This review examines the role of glycolytic and tricarboxylic acid cycle metabolism with special emphasis on flux through the pentose phosphate pathway (PPP). The impact of reversibility of the nonoxidative branch of the PPP with various C-13 glucose tracers on fine-structure multiplets is analyzed.
引用
收藏
页数:17
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