Integrated microscale immiscible phase extraction and isothermal amplification for colorimetric detection of Neisseria gonorrhoeae

被引:3
|
作者
Rodriguez-Mateos, Pablo [1 ]
Ngamsom, Bongkot [2 ]
Ameyo, Daglus [3 ]
Wakaba, Patrick [3 ]
Shiluli, Clement [3 ]
Iles, Alexander [1 ]
Gitaka, Jesse [3 ]
Pamme, Nicole [1 ,4 ]
机构
[1] Stockholm Univ, Dept Mat & Environm Chem, Stockholm, Sweden
[2] Univ Hull, Ctr Biomed, Hull York Med Sch, Kingston Upon Hull, England
[3] Mt Kenya Univ, Directorate Res & Innovat, Thika, Kenya
[4] Univ Hull, Sch Nat Sci, Kingston Upon Hull, England
关键词
Immiscible filtration; DNA extraction; Magnetic particle; NAAT; LAMP; Neisseria gonorrhoeae; CHLAMYDIA-TRACHOMATIS; PURIFICATION; PERFORMANCE; IFAST; ASSAY; CT/NG;
D O I
10.1007/s00216-023-04734-3
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Gonorrhea is the second most common sexually transmitted infection (STI) with around 87 million cases worldwide estimated in 2016 by the World Health Organization. With over half of the cases being asymptomatic, potential life-threatening complications and increasing numbers of drug-resistant strains, routine monitoring of prevalence and incidence of infections are key preventive measures. Whilst gold standard qPCR tests have excellent accuracy, they are neither affordable nor accessible in low-resource settings. In this study, we developed a lab-on-a-chip platform based on microscale immiscible filtration to extract, concentrate and purify Neisseria gonorrhoeae DNA with an integrated detection assay based on colorimetric isothermal amplification. The platform was capable of detecting as low as 500 copies/mL from spiked synthetic urine and showed no cross-reactivity when challenged with DNAs from other common STIs. The credit card-size device allows DNA extraction and purification without power or centrifuges, and the detection reaction only needs a low-tech block heater, providing a straightforward and visual positive/negative result within 1 h. These advantages offer great potential for accurate, affordable and accessible monitoring of gonorrhea infection in resource-poor settings.
引用
收藏
页码:5129 / 5137
页数:9
相关论文
共 50 条
  • [1] Integrated microscale immiscible phase extraction and isothermal amplification for colorimetric detection of Neisseria gonorrhoeae
    Pablo Rodriguez-Mateos
    Bongkot Ngamsom
    Daglus Ameyo
    Patrick Wakaba
    Clement Shiluli
    Alexander Iles
    Jesse Gitaka
    Nicole Pamme
    Analytical and Bioanalytical Chemistry, 2023, 415 : 5129 - 5137
  • [2] Multiplex isothermal helicase-dependent amplification assay for detection of Chlamydia trachomatis and Neisseria gonorrhoeae
    Doseeva, Victoria
    Forbes, Thomas
    Wolff, John
    Khripin, Yuri
    O'Neil, Dominic
    Rothmann, Thomas
    Nazarenko, Irina
    DIAGNOSTIC MICROBIOLOGY AND INFECTIOUS DISEASE, 2011, 71 (04) : 354 - 365
  • [3] COUPLING OF ELECTROCHEMICAL DETECTION WITH PCR AMPLIFICATION FOR SENSITIVE DETECTION OF NEISSERIA GONORRHOEAE
    Sood, S.
    Verma, R.
    Singh, R.
    Sumana, G.
    Sharma, V. K.
    Samataray, J. C.
    Pandey, R. M.
    Malhotra, B. D.
    SEXUALLY TRANSMITTED INFECTIONS, 2011, 87 : A307 - A307
  • [4] Detection and Drug Susceptibility Testing of Neisseria gonorrhoeae Using Isothermal Microcalorimetry
    Gruetter, Anabel E.
    Lafranca, Tecla
    Sigg, Aurelia Pahnita
    Mariotti, Max
    Bonkat, Gernot
    Braissant, Olivier
    MICROORGANISMS, 2021, 9 (11)
  • [5] Loop-Mediated Isothermal Amplification Test for Detection of Neisseria gonorrhoeae in Urine Samples and Tolerance of the Assay to the Presence of Urea
    Edwards, Thomas
    Burke, Patricia A.
    Smalley, Helen B.
    Gillies, Liz
    Hobbs, Glyn
    JOURNAL OF CLINICAL MICROBIOLOGY, 2014, 52 (06) : 2163 - 2165
  • [6] Isothermal amplification based on specific signal extraction and output for fluorescence and colorimetric detection of nucleic acids
    He, Shuya
    Zhou, Yan
    Xie, Yaoqi
    Zhang, Kaijiong
    He, Qiao
    Yin, Gang
    Zou, Haimin
    Hu, Qiongying
    Zhang, Shilu
    He, Hongfei
    Wang, Dongsheng
    TALANTA, 2023, 252
  • [7] Evaluation of the specificities of five DNA amplification methods for the detection of Neisseria gonorrhoeae
    Palmer, HM
    Mallinson, H
    Wood, RL
    Herring, AJ
    JOURNAL OF CLINICAL MICROBIOLOGY, 2003, 41 (02) : 835 - 837
  • [8] A Loop-Mediated Isothermal Amplification Assay Targeting Neisseria gonorrhoeae penA-60.001
    Shimuta, Ken
    Nakayama, Shu-ichi
    Takahashi, Hideyuki
    Ohnishi, Makoto
    ANTIMICROBIAL AGENTS AND CHEMOTHERAPY, 2020, 64 (01)
  • [9] Colorimetric detection of human papilloma virus by double isothermal amplification
    Persano, Stefano
    Valentini, Paola
    Kim, Joong Hyun
    Pompa, Pier Paolo
    CHEMICAL COMMUNICATIONS, 2013, 49 (90) : 10605 - 10607
  • [10] Evaluation of Six Commercial Nucleic Acid Amplification Tests for Detection of Neisseria gonorrhoeae and Other Neisseria Species
    Tabrizi, Sepehr N.
    Unemo, Magnus
    Limnios, Athena E.
    Hogan, Tiffany R.
    Hjelmevoll, Stig-Ove
    Garland, Susanne M.
    Tapsall, John
    JOURNAL OF CLINICAL MICROBIOLOGY, 2011, 49 (10) : 3610 - 3615