Identification of ferroptosis-associated biomarkers in Stanford type A aortic dissection based on machine learning

被引:0
|
作者
Pan, Hao [1 ]
Lu, Wei [2 ]
Liu, Zhifei [1 ]
Wang, Yu [1 ]
机构
[1] Shandong First Med Univ, Dept Anesthesiol, Shandong Prov Hosp, 324 Jingwu Rd, Jinan 250021, Shandong, Peoples R China
[2] Shandong First Med Univ, Dept Oral & Maxillofacial Surg, Shandong Prov Hosp, Jinan, Shandong, Peoples R China
来源
关键词
Stanford type A aortic dissection; ferroptosis; immune infiltration; characteristic genes; pan-cancer analysis; drug sensitivity; INTERNATIONAL REGISTRY; INFLAMMATION; OUTCOMES; DAZAP1;
D O I
暂无
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Background: Stanford type A aortic dissection (STAAD) is a serious cardiovascular disease with a high mortality rate. Ferroptosis is closely associated with various diseases, including cardiovascular disease. However, the role of ferroptosis in the progression of STAAD remains unclear. Methods: Gene expression profiles of GSE52093, GSE98770, and GSE153434 datasets were downloaded from the Gene Expression Omnibus (GEO) database. Weighted gene co-expression network analysis (WGCNA), least absolute shrinkage and selection operator (LASSO), and support vector machine-recursive feature elimination (SVM-RFE) were performed to determine the ferroptosis-associated characteristic genes in STAAD. Receiver operating characteristic (ROC) curve analysis was performed to evaluate the diagnostic efficacy. Furthermore, immune cell infiltrations were analyzed using the CIBERSORT algorithm. Drug sensitivity analysis was conducted based on the CellMiner database. Results: A total of 65 differentially expressed ferroptosis-associated genes were screened. DAZAP1 and GABARAPL2 were identified as valuable diagnostic biomarkers for STAAD. A nomogram with high accuracy and reliability was constructed as a diagnostic tool for STAAD. Furthermore, immune infiltration analysis suggested that monocytes were higher in the STAAD group compared with the control group. DAZAP1 was positively correlated with monocytes, whereas GABARAPL2 was negatively correlated with monocytes. Pan-cancer analysis showed that DAZAP1 and GABARAPL2 were closely associated with the prognosis of various cancers. In addition, some antitumor drugs might be useful for the treatment of STAAD. Conclusion: DAZAP1 and GABARAPL2 might serve as potential diagnostic biomarkers for STAAD. Meanwhile, DAZAP1 and GABARAPL2 might be related to cancer and STAAD in terms of ferroptosis, which provides insights into developing new therapeutic approaches for STAAD.
引用
收藏
页码:3092 / +
页数:29
相关论文
共 50 条
  • [1] Identification of potential ferroptosis-associated biomarkers in rheumatoid arthritis
    He, Xu
    Zhang, Juqi
    Gong, Mingli
    Gu, Yanlun
    Dong, Bingqi
    Pang, Xiaocong
    Zhang, Chenglong
    Cui, Yimin
    FRONTIERS IN IMMUNOLOGY, 2023, 14
  • [2] Bioinformatics Identification of Ferroptosis-Associated Biomarkers and Therapeutic Compounds in Psoriasis
    Mao, Jingyi
    Ma, Xin
    JOURNAL OF ONCOLOGY, 2022, 2022
  • [3] Identification of biomarkers associated with ferroptosis in diabetic retinopathy based on WGCNA and machine learning
    Guo, Hui-qing
    Xue, Rong
    Wan, Guangming
    FRONTIERS IN GENETICS, 2024, 15
  • [4] Identification of ferroptosis-associated biomarkers for the potential diagnosis and treatment of postmenopausal osteoporosis
    Hu, Yunxiang
    Han, Jun
    Ding, Shengqiang
    Liu, Sanmao
    Wang, Hong
    FRONTIERS IN ENDOCRINOLOGY, 2022, 13
  • [5] Aortic Dissection Repair of Both Stanford Type A and Stanford Type B Aortic Dissection in Teaching Hospitals is Associated With Lower Mortality
    Li, Renxi
    Luo, Qianyun
    Green, Derrick L.
    Huddleston, Stephen
    CIRCULATION, 2023, 148
  • [6] Stanford type A aortic dissection
    Czerny M.
    Kreibich M.
    Gefässchirurgie, 2016, 21 (4) : 261 - 269
  • [7] REVEALING MYOCD AS A POTENTIAL DIAGNOSTIC GENE BIOMARKER OF THE ACUTE STANFORD TYPE A AORTIC DISSECTION BASED ON MACHINE LEARNING ANALYSIS
    Wang, Luchen
    Liu, Yanxiang
    Sun, Xiaogang
    JOURNAL OF THE AMERICAN COLLEGE OF CARDIOLOGY, 2024, 83 (13) : 2242 - 2242
  • [8] Chronic Stanford type A aortic dissection
    Raffa, Giuseppe M.
    Pilato, Michele
    Armaro, Alessandro
    Ruperto, Cettina
    Gentile, Giovanni
    Follis, Fabrizio
    JOURNAL OF CARDIOVASCULAR MEDICINE, 2016, 17 : E138 - E140
  • [9] Predicting reintervention after thoracic endovascular aortic repair of Stanford type B aortic dissection using machine learning
    Dong, Yuhao
    Que, Lifeng
    Jia, Qianjun
    Xi, Yue
    Zhuang, Jian
    Li, Jinglei
    Liu, Hui
    Chen, Weiqi
    Huang, Meiping
    EUROPEAN RADIOLOGY, 2022, 32 (01) : 355 - 367
  • [10] Predicting reintervention after thoracic endovascular aortic repair of Stanford type B aortic dissection using machine learning
    Yuhao Dong
    Lifeng Que
    Qianjun Jia
    Yue Xi
    Jian Zhuang
    Jinglei Li
    Hui Liu
    Weiqi Chen
    Meiping Huang
    European Radiology, 2022, 32 : 355 - 367