A novel bidirectional LSTM deep learning approach for COVID-19 forecasting

被引:2
|
作者
Aung, Nway Nway [1 ]
Pang, Junxiong [2 ,4 ]
Chua, Matthew Chin Heng [3 ]
Tan, Hui Xing [1 ]
机构
[1] Natl Univ Singapore, Inst Syst Sci, 25 Heng Mui Keng Terrace, Singapore City 119615, Singapore
[2] Natl Univ Singapore, Saw Swee Hock Sch Publ Hlth, Singapore City, Singapore
[3] Natl Univ Singapore, Yong Loo Lin Sch Med, Dept Biomed Informat, 1E Kent Ridge Rd, Singapore City 119228, Singapore
[4] NUS, SingHlth Duke NUS Global Hlth Inst, Ctr Outbreak Preparedness, Duke NUS Med Sch, Singapore City, Singapore
关键词
D O I
10.1038/s41598-023-44924-8
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
COVID-19 has resulted in significant morbidity and mortality globally. We develop a model that uses data from thirty days before a fixed time point to forecast the daily number of new COVID-19 cases fourteen days later in the early stages of the pandemic. Various time-dependent factors including the number of daily confirmed cases, reproduction number, policy measures, mobility and flight numbers were collected. A deep-learning model using Bidirectional Long-Short Term Memory (Bi-LSTM) architecture was trained on data from 22nd Jan 2020 to 8 Jan 2021 to forecast the new daily number of COVID-19 cases 14 days in advance across 190 countries, from 9 to 31 Jan 2021. A second model with fewer variables but similar architecture was developed. Results were summarised by mean absolute error (MAE), root mean squared error (RMSE), mean absolute percentage error (MAPE), and total absolute percentage error and compared against results from a classical ARIMA model. Median MAE was 157 daily cases (IQR: 26-666) under the first model, and 150 (IQR: 26-716) under the second. Countries with more accurate forecasts had more daily cases and experienced more waves of COVID-19 infections. Among countries with over 10,000 cases over the prediction period, median total absolute percentage error was 33% (IQR: 18-59%) and 34% (IQR: 16-66%) for the first and second models respectively. Both models had comparable median total absolute percentage errors but lower maximum total absolute percentage errors as compared to the classical ARIMA model. A deep-learning approach using Bi-LSTM architecture and open-source data was validated on 190 countries to forecast the daily number of cases in the early stages of the COVID-19 outbreak. Fewer variables could potentially be used without impacting prediction accuracy.
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页数:11
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