Analysis of intestinal flora and cognitive function in maintenance hemodialysis patients using combined 16S ribosome DNA and shotgun metagenome sequencing

被引:3
|
作者
Gao, Qiuyi [1 ]
Li, Dianshi [2 ]
Wang, Yue [3 ]
Zhao, Chunhui [1 ]
Li, Mingshuai [4 ]
Xiao, Jingwen [4 ]
Kang, Yan [4 ]
Lin, Hongli [1 ]
Wang, Nan [1 ]
机构
[1] First Affiliated Hosp Dalian Med Univ, Dept Pathol, Dalian, Peoples R China
[2] Univ Macau, Fac Law, Ctr Empir Legal Studies, Macau, Peoples R China
[3] Binzhou Med Univ, Shengli Oilfield Cent Hosp, Dept Nephrol, Binzhou, Peoples R China
[4] Dalian Med Univ, Sch Grad, Dalian, Peoples R China
关键词
Cognitive function; Intestinal flora; Microbiota; Maintenance dialysis; 16S rDNA; Shotgun metagenome sequencing; FAECALIBACTERIUM-PRAUSNITZII; GUT MICROBIOTA; METABOLOME; COMMUNITY; DEMENTIA; CKD;
D O I
10.1007/s40520-023-02645-y
中图分类号
R592 [老年病学]; C [社会科学总论];
学科分类号
03 ; 0303 ; 100203 ;
摘要
BackgroundCognitive impairment is widely prevalent in maintenance hemodialysis (MHD) patients, and seriously affects their quality of life. The intestinal flora likely regulates cognitive function, but studies on cognitive impairment and intestinal flora in MHD patients are lacking.MethodsMHD patients (36) and healthy volunteers (18) were evaluated using the Montreal Cognitive Function Scale, basic clinical data, and 16S ribosome DNA (rDNA) sequencing. Twenty MHD patients and ten healthy volunteers were randomly selected for shotgun metagenomic analysis to explore potential metabolic pathways of intestinal flora. Both16S rDNA sequencing and shotgun metagenomic sequencing were conducted on fecal samples.ResultsRoseburia were significantly reduced in the MHD group based on both 16S rDNA and shotgun metagenomic sequencing analyses. Faecalibacterium, Megamonas, Bifidobacterium, Parabacteroides, Collinsella, Tyzzerella, and Phascolarctobacterium were positively correlated with cognitive function or cognitive domains. Enriched Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways included oxidative phosphorylation, photosynthesis, retrograde endocannabinoid signaling, flagellar assembly, and riboflavin metabolism.ConclusionAmong the microbiota, Roseburia may be important in MHD patients. We demonstrated a correlation between bacterial genera and cognitive function, and propose possible mechanisms.
引用
收藏
页数:13
相关论文
共 50 条
  • [1] Analysis of intestinal flora and cognitive function in maintenance hemodialysis patients using combined 16S ribosome DNA and shotgun metagenome sequencing
    Qiuyi Gao
    Dianshi Li
    Yue Wang
    Chunhui Zhao
    Mingshuai Li
    Jingwen Xiao
    Yan Kang
    Hongli Lin
    Nan Wang
    Aging Clinical and Experimental Research, 36
  • [2] Analysis of the intestinal microbiota using SOLiD 16S rRNA gene sequencing and SOLiD shotgun sequencing
    Suparna Mitra
    Karin Förster-Fromme
    Antje Damms-Machado
    Tim Scheurenbrand
    Saskia Biskup
    Daniel H Huson
    Stephan C Bischoff
    BMC Genomics, 14
  • [3] Analysis of the intestinal microbiota using SOLiD 16S rRNA gene sequencing and SOLiD shotgun sequencing
    Mitra, Suparna
    Foerster-Fromme, Karin
    Damms-Machado, Antje
    Scheurenbrand, Tim
    Biskup, Saskia
    Huson, Daniel H.
    Bischoff, Stephan C.
    BMC GENOMICS, 2013, 14
  • [4] Diversity of thermophiles in a Malaysian hot spring determined using 16S rRNA and shotgun metagenome sequencing
    Chan, Chia Sing
    Chan, Kok-Gan
    Tay, Yea-Ling
    Chua, Yi-Heng
    Goh, Kian Mau
    FRONTIERS IN MICROBIOLOGY, 2015, 6
  • [5] Characterization of Intestinal Flora in Osteoporosis Patients Based on 16S rDNA Sequencing
    Sun, Mengyue
    Liu, Yuanyuan
    Tang, Shan
    Li, Yiming
    Zhang, Ridong
    Mao, Li
    INTERNATIONAL JOURNAL OF GENERAL MEDICINE, 2024, 17 : 4311 - 4324
  • [6] Correlation analysis of breast fibroadenoma and the intestinal flora based on 16S rRNA sequencing
    Bingdong Wang
    Xin Liu
    Yahong Bian
    Guoxin Sun
    Huizhe Wang
    Jingjin Zhang
    Zhengfu Zhang
    Xiao Zou
    Oncology and Translational Medicine, 2021, 7 (06) : 269 - 274
  • [7] Analysis of Characteristics of Patients on Maintenance Hemodialysis and Subjective Cognitive Decline Based on Intestinal Flora
    Liu Hua
    JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY, 2024, 35 (10):
  • [8] Effects of Repetitive Transcranial Magnetic Stimulation on Cognitive Function and Intestinal Flora in Patients on Maintenance Hemodialysis
    Liu Hua
    JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY, 2024, 35 (10):
  • [9] 16S full-length gene sequencing analysis of intestinal flora in breast cancer patients in Hainan Province
    Jiang, Yonglan
    Gong, Wei
    Xian, Zhenyong
    Xu, Weihua
    Hu, Junjie
    Ma, Zhichao
    Dong, Huaying
    Lin, Chong
    Fu, Shengmiao
    Chen, Xinping
    MOLECULAR AND CELLULAR PROBES, 2023, 71
  • [10] Structural difference analysis of adult's intestinal flora basing on the 16S rDNA gene sequencing technology
    Yu, H-J
    Jing, C.
    Xiao, N.
    Zang, X-M
    Zhang, C-Y
    Zhang, X.
    Qu, Y-N
    Li, Y.
    Tan, Q-W
    EUROPEAN REVIEW FOR MEDICAL AND PHARMACOLOGICAL SCIENCES, 2020, 24 (24) : 12983 - 12992