A Genome-Wide Association Study of Respiratory Syncytial Virus Infection Severity in Infants

被引:1
|
作者
Johnson, Mari [1 ,2 ,3 ,12 ]
Chelysheva, Irina [1 ,2 ,3 ]
Oener, Deniz [4 ]
Mcginley, Joseph [1 ,2 ,3 ]
Lin, Gu-Lung [1 ,2 ,3 ]
O'Connor, Daniel [1 ,2 ,3 ]
Robinson, Hannah [1 ,2 ,3 ]
Drysdale, Simon B. [1 ,2 ,3 ]
Gammin, Emma [1 ,2 ,3 ]
Vernon, Sophie [1 ,2 ,3 ]
Muller, Jill [1 ,2 ,3 ]
Wolfenden, Helen [5 ]
Westcar, Sharon [5 ]
Anguvaa, Lazarus [6 ]
Thwaites, Ryan S. [7 ]
Bont, Louis [8 ]
Wildenbeest, Joanne [1 ,8 ]
Martinon-Torres, Federico [9 ,10 ,11 ]
Aerssens, Jeroen [4 ]
Openshaw, Peter J. M. [7 ]
Pollard, Andrew J. [1 ,2 ,3 ]
机构
[1] Univ Oxford, Dept Paediat, Oxford Vaccine Grp, Oxford, England
[2] NIHR Oxford Biomed Res Ctr, Oxford, England
[3] Oxford Univ Hosp NHS Fdn Trust, Oxford, England
[4] Janssen Pharmaceut NV, Biomarkers Infect Dis, Beerse, Belgium
[5] Royal Berkshire NHS Fdn Trust, Reading, England
[6] Milton Keynes Gen Hosp NHS Trust, Milton Keynes, England
[7] Imperial Coll London, Natl Heart & Lung Inst, London, England
[8] Univ Med Ctr Utrecht, Wilhelmina Childrens Hosp, Dept Paediat Infect Dis & Immunol, Utrecht, Netherlands
[9] Hosp Clin Univ Santiago De Compostela, Dept Pediat, Translat Pediat & Infect Dis, Santiago De Compostela, Spain
[10] Univ Santiago De Compostela, Inst Invest Sanitaria Santiago, Genet Vaccines & Infect Res Grp, Santiago De Compostela, Spain
[11] Inst Salud Carlos III, Ctr Invest Biomed Red Enfermedades Resp, Madrid, Spain
[12] Fred Hutch Canc Res Ctr, Dept Biostat, Seattle, WA 98109 USA
来源
关键词
RSV; GWAS; eQTL; infection; inflammation; ANNOTATION;
D O I
10.1093/infdis/jiae029
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
Background. Respiratory syncytial virus (RSV) is a significant cause of infant morbidity and mortality worldwide. Most children experience at least one 1 RSV infection by the age of two 2 years, but not all develop severe disease. However, the understanding of genetic risk factors for severe RSV is incomplete. Consequently, we conducted a genome-wide association study of RSV severity. Methods. Disease severity was assessed by the ReSVinet scale, in a cohort of 251 infants aged 1 week to 1 year. Genotyping data were collected from multiple European study sites as part of the RESCEU Consortium. Linear regression models were used to assess the impact of genotype on RSV severity and gene expression as measured by microarray. Results. While no SNPs reached the genome-wide statistical significance threshold (P < 5 x 10(-8)), we identified 816 candidate SNPs with a P-value of <1 x 10(-4). Functional annotation of candidate SNPs highlighted genes relevant to neutrophil trafficking and cytoskeletal functions, including LSP1 and RAB27A. Moreover, SNPs within the RAB27A locus significantly altered gene expression (false discovery rate, FDR P < .05). Conclusions. These findings may provide insights into genetic mechanisms driving severe RSV infection, offering biologically relevant information for future investigations.
引用
收藏
页码:S112 / S119
页数:8
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