Application of novel hybrid machine learning systems and radiomics features for non-motor outcome prediction in Parkinson's disease

被引:5
|
作者
Salmanpour, Mohammad R. [1 ,2 ,3 ]
Bakhtiyari, Mahya [3 ,4 ]
Hosseinzadeh, Mahdi [3 ,5 ]
Maghsudi, Mehdi [6 ]
Yousefirizi, Fereshteh [2 ]
Ghaemi, Mohammad M. [3 ,7 ,8 ]
Rahmim, Arman [1 ,2 ]
机构
[1] Univ British Columbia, Dept Phys & Astron, Vancouver, BC, Canada
[2] BC Canc Res Inst, Dept Integrat Oncol, Vancouver, BC, Canada
[3] TECVICO Corp, Technol Virtual Collaborat, Vancouver, BC, Canada
[4] Islamic Azad Univ, Dept Elect & Comp Engn, South Tehran Branch, Tehran, Iran
[5] Univ Tarbiat Modares, Dept Elect & Comp Engn, Tehran, Iran
[6] Iran Univ Med Sci, Rajaie Cardiovasc Med & Res Ctr, Tehran, Iran
[7] Kerman Univ Med Sci, Inst Futures Studies Hlth, Med Informat Res Ctr, Kerman, Iran
[8] Kerman Univ Med Sci, Dept Hlth Informat Management, Kerman, Iran
来源
PHYSICS IN MEDICINE AND BIOLOGY | 2023年 / 68卷 / 03期
基金
加拿大自然科学与工程研究理事会;
关键词
Parkinson's disease; prediction of non-motor symptom; dimension reduction algorithms; prediction algorithms; hybrid machine learning systems; radiomics features; timeless dataset; REGRESSION-ANALYSIS; FEATURE-SELECTION; DIMENSIONALITY; PROGRESSION; ALGORITHM; SYMPTOMS; DEMENTIA; KERNEL;
D O I
10.1088/1361-6560/acaba6
中图分类号
R318 [生物医学工程];
学科分类号
0831 ;
摘要
Objectives. Parkinson's disease (PD) is a complex neurodegenerative disorder, affecting 2%-3% of the elderly population. Montreal Cognitive Assessment (MoCA), a rapid nonmotor screening test, assesses different cognitive dysfunctionality aspects. Early MoCA prediction may facilitate better temporal therapy and disease control. Radiomics features (RF), in addition to clinical features (CF), are indicated to increase clinical diagnoses, etc, bridging between medical imaging procedures and personalized medicine. We investigate the effect of RFs, CFs, and conventional imaging features (CIF) to enhance prediction performance using hybrid machine learning systems (HMLS). Methods. We selected 210 patients with 981 features (CFs, CIFs, and RFs) from the Parkinson's Progression-Markers-Initiative database. We generated 4 datasets, namely using (i), (ii) year-0 (D1) or year-1 (D2) features, (iii) longitudinal data (D3, putting datasets in years 0 and 1 longitudinally next to each other), and (iv) timeless data (D4, effectively doubling dataset size by listing both datasets from years 0 and 1 separately). First, we directly applied 23 predictor algorithms (PA) to the datasets to predict year-4 MoCA, which PD patients this year have a higher dementia risk. Subsequently, HMLSs, including 14 attribute extraction and 10 feature selection algorithms followed by PAs were employed to enhance prediction performances. 80% of all datapoints were utilized to select the best model based on minimum mean absolute error (MAE) resulting from 5-fold cross-validation. Subsequently, the remaining 20% was used for hold-out testing of the selected models. Results. When applying PAs without ASAs/FEAs to datasets (MoCA outcome range: [11,30]), Adaboost achieved an MAE of 1.74 +/- 0.29 on D4 with a hold-out testing performance of 1.71. When employing HMLSs, D4 + Minimum_Redundancy_Maximum_Relevance (MRMR)+K_Nearest_Neighbor Regressor achieved the highest performance of 1.05 +/- 0.25 with a hold-out testing performance of 0.57. Conclusion. Our study shows the importance of using larger datasets (timeless), and utilizing optimized HMLSs, for significantly improved prediction of MoCA in PD patients.
引用
收藏
页数:12
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