A De Novo Whole Genome Assembly and Annotation of Parelaphostrongylus tenuis

被引：0

作者：

Garwood, Tyler J. ^{[1
]}

Richards, Jessie E. ^{[2
]}

Macchietto, Marissa G. ^{[3
]}

Gerhold, Richard W. ^{[2
]}

Kania, Stephen A. ^{[2
]}

Garbe, John R. ^{[4
]}

Fountain-Jones, Nicholas M. ^{[5
]}

Larsen, Peter A. ^{[6
]}

Wolf, Tiffany M. ^{[1
]}

机构：

[1] Univ Minnesota Twin Cities, Coll Vet Med, Dept Vet Populat Med, Room 495 Anim Sci-Vet Med Bldg,1988 Fitch Ave, St Paul, MN 55108 USA

[2] Univ Tennessee Knoxville, Coll Vet Med, Dept Biomed & Diagnost Sci, 2407 River Dr, Knoxville, TN 37996 USA

[3] Univ Minnesota Twin Cities, Minnesota Supercomp Inst, 117 Pleasant St SE,547 Walter Lib, Minneapolis, MN 55455 USA

[4] Univ Minnesota Twin Cities, Genom Ctr, 2231 6th St SE, Minneapolis, MN 55455 USA

[5] Univ Tasmania, Sch Nat Sci, Private Bag 37, Hobart, Tas 7001, Australia

[6] Univ Minnesota Twin Cities, Coll Vet Med, Dept Vet & Biomed Sci, Room 239B Vet Sci Bldg, 1971 Commonwealth Ave, St Paul, MN 55108 USA

来源：

JOURNAL OF NEMATOLOGY | 2024年 / 56卷 / 01期

关键词：

Annotation; assembly; brainworm; genome; genomics; meningeal worm; Parelaphostrongylus tenuis; reference; MENINGEAL WORM; DYNAMICS; DATABASE; HOST;

D O I：

10.2478/jofnem-2024-0009

中图分类号：

Q95 [动物学];

学科分类号：

071002 ;

摘要：

Parelaphostrongylus tenuis causes ungulate morbidity and mortality in eastern and central North America, but no reference genome sequence exists to facilitate research. Here, we present a P. tenuis genome assembly and annotation, generated with PacBio and Illumina technologies. The assembly is 491 Mbp, with 7285 scaffolds and 185 kb N50.

引用

页数：7

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