Identification and Validation of Three m6A Regulators: FTO, HNRNPC, and HNRNPA2B1 as Potential Biomarkers for Endometriosis

被引:5
|
作者
Sun, Jiani [1 ]
Gan, Lei [2 ]
Sun, Jing [1 ]
机构
[1] Tongji Univ, Shanghai Matern & Infant Hosp 1, Shanghai Inst Maternal Fetal Med & Gynecol Oncol, Sch Med, Shanghai 200092, Peoples R China
[2] Ningbo First Hosp, Dept Gynaecol & Obstet, Ningbo 315010, Peoples R China
关键词
endometriosis; m6A RNA methylation regulators; random forest; consensus clustering; immune infiltration; pyroptosis; inflammation; PERITONEAL-FLUID; WOMEN; PATHOGENESIS; GENES; CELLS;
D O I
10.3390/genes14010086
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Background: N6-methyladenosine is involved in numerous biological processes. However, the significance of m6A regulators in endometriosis is still unclear. Methods: We extracted three significant m6A regulators between non-endometriosis and endometriosis patients from GSE6364 and then we used the random forest model to obtain significant m6A regulators. In addition, we used the nomogram model to evaluate the prevalence of endometriosis. The predictive ability of the candidate genes was evaluated through the receiver operating characteristic curves, while the expression of candidate biomarkers was validated via Western blotting. Additionally, according to candidate genes, we identified m6A subtypes based on which functional enrichment analysis and immune infiltration were performed. Results: Three significant m6A regulators (fat mass and obesity-associated protein, heterogeneous nuclear ribonucleoprotein A2/B1, and heterogeneous nuclear ribonucleoprotein C) were discovered. We identified three m6A subtypes, including clusterA, clusterB, and clusterC. ClusterB was demonstrated to be correlated with significantly overexpressed VEGF and notably downregulated ESR1 and PGR, which are convincing biomarkers of endometriosis. Furthermore, we discovered that patients in clusterB were associated with high levels of neutrophil infiltration, a reduced Treg/Th17 ratio, and overexpressed pyroptosis-related genes, which also indicated that clusterB was highly linked to endometriosis. Conclusion: In conclusion, m6A regulators are of great significance for the occurrence and process of endometriosis. The findings of our study provide novel insights into the underlying molecular mechanism of endometriosis. The novel investigation of m6A patterns and their correlation with immunity may also help to guide the clinical diagnosis, provide prognostic significance, and develop immunotherapy strategies for endometriosis patients.
引用
收藏
页数:15
相关论文
共 50 条
  • [1] Identification and experimental validation of key m6A modification regulators as potential biomarkers of osteoporosis
    Qiao, Yanchun
    Li, Jie
    Liu, Dandan
    Zhang, Chenying
    Liu, Yang
    Zheng, Shuguo
    FRONTIERS IN GENETICS, 2023, 13
  • [2] m6A reader hnRNPA2B1 drives multiple myeloma osteolytic bone disease
    Liu, Rui
    Zhong, Yuping
    Chen, Rui
    Chu, Chengchao
    Liu, Gang
    Zhou, Yong
    Huang, Yazhu
    Fang, Zhihong
    Liu, Huan
    THERANOSTICS, 2022, 12 (18): : 7760 - 7774
  • [3] HNRNPA2B1, as a m6A Reader, Promotes Tumorigenesis and Metastasis of Oral Squamous Cell Carcinoma
    Zhu, Feiya
    Yang, Tianru
    Yao, Mianfeng
    Shen, Ting
    Fang, Changyun
    FRONTIERS IN ONCOLOGY, 2021, 11
  • [4] Identification of autoantibodies to ECH1 and HNRNPA2B1 as potential biomarkers in the early detection of lung cancer
    Dai, Liping
    Li, Jitian
    Tsay, Jun-Chieh J.
    Yie, Ting-An
    Munger, John S.
    Pass, Harvey
    Rom, William N.
    Tan, Eng M.
    Zhang, Jian-Ying
    ONCOIMMUNOLOGY, 2017, 6 (05):
  • [5] Identification of autoantibody to ECH1 & HNRNPA2B1 as potential biomarkers in the early detection of lung cancer
    Dai, Liping
    Li, Jitian
    Tsay, Jun-Chieh J.
    Wang, Xiao
    Munger, John S.
    Pass, Harvey
    Rom, William N.
    Tan, Eng M.
    Zhang, Jian-Ying
    CANCER RESEARCH, 2017, 77
  • [6] Melatonin Regulates Osteoblast Differentiation through the m6A Reader hnRNPA2B1 under Simulated Microgravity
    Sun, Quan
    Xu, Liqun
    Hu, Zebing
    Liu, Jingchun
    Yu, Tingfei
    Li, Meng
    Zhang, Shu
    Shi, Fei
    CURRENT ISSUES IN MOLECULAR BIOLOGY, 2024, 46 (09) : 9624 - 9638
  • [7] Upregulation of M6A Reader HNRNPA2B1 Associated with Poor Prognosis and Tumor Progression in Lung Adenocarcinoma
    Wang, Wei
    Li, Shengwei
    RECENT PATENTS ON ANTI-CANCER DRUG DISCOVERY, 2024, 19 (05) : 652 - 665
  • [8] N6-methyladenosine (m6A) reader HNRNPA2B1 accelerates the cervical cancer cells aerobic glycolysis
    Wen, Mengke
    Yi, Na
    Mijiti, Bulabiyamu
    Zhao, Shihong
    Shen, Guqun
    JOURNAL OF BIOENERGETICS AND BIOMEMBRANES, 2024, 56 (06) : 657 - 668
  • [9] Identification of miR-30c-5p as a tumor suppressor by targeting the m6A reader HNRNPA2B1 in ovarian cancer
    Wu, Qiulei
    Li, Guoqing
    Gong, Lanqing
    Cai, Jing
    Chen, Le
    Xu, Xiaohan
    Liu, Xiaoli
    Zhao, Jing
    Zeng, Ya
    Gao, Rui
    Yu, Lili
    Wang, Zehua
    CANCER MEDICINE, 2023, 12 (04): : 5055 - 5070
  • [10] Novel evidence for m6A methylation regulators as prognostic biomarkers and FTO as a potential therapeutic target in gastric cancer
    Shimura, Tadanobu
    Kandimalla, Raju
    Okugawa, Yoshinaga
    Ohi, Masaki
    Toiyama, Yuji
    He, Chuan
    Goel, Ajay
    BRITISH JOURNAL OF CANCER, 2022, 126 (02) : 228 - 237