An angiogenesis-related three-long non-coding ribonucleic acid signature predicts the immune landscape and prognosis in hepatocellular carcinoma

被引:9
|
作者
Wang, Wenjuan [1 ]
Ye, Yingquan [2 ]
Zhang, Xuede [3 ]
Sun, Weijie [2 ]
Bao, Lingling [1 ]
机构
[1] Beilun Dist Peoples Hosp, Dept Hematol & Oncol, Ningbo, Peoples R China
[2] Anhui Med Univ, Affiliated Hosp 1, Hefei, Peoples R China
[3] Weifang Peoples Hosp, Dept Oncol, Weifang, Peoples R China
关键词
Hepatocellular carcinoma; Angiogenesis; Long noncoding RNA; Tumour immune microenvironment; Prognostic signature; TUMOR MICROENVIRONMENT; GROWTH-FACTOR; CANCER; EXPRESSION; METHYLATION; HALLMARKS; PATTERNS; RNAS;
D O I
10.1016/j.heliyon.2023.e13989
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The tumour microenvironment is a key determinant of the efficacy of immunotherapy. Angio-genesis is closely linked to tumour immunity. We aimed to screen long non-coding ribonucleic acids (lncRNAs) associated with angiogenesis to predict the prognosis of individuals with hepa-tocellular carcinoma (HCC) and characterise the tumour immune microenvironment (TIME). Patient data, including transcriptome and clinicopathological parameters, were retrieved from The Cancer Genome Atlas database. Moreover, co-expression algorithm was utilized to obtain angiogenesis-related lncRNAs. Additionally, survival-related lncRNAs were identified using Cox regression and the least absolute shrinkage and selection operator algorithm, which aided in constructing an angiogenesis-related lncRNA signature (ARLs). The ARLs was validated using Kaplan-Meier method, time-dependent receiver operating characteristic analyses, and Cox regression. Additionally, an independent external HCC dataset was used for further validation. Then, gene set enrichment analysis, immune landscape, and drug sensitivity analyses were implemented to explore the role of the ARLs. Finally, cluster analysis divided the entire HCC dataset into two clusters to distinguish different subtypes of TIME. This study provides insight into the involvement of angiogenesis-associated lncRNAs in predicting the TIME characteristics and prognosis for individuals with HCC. Furthermore, the developed ARLs and clusters can predict the prognosis and TIME characteristics in HCC, thereby aiding in selecting the appropriate therapeutic strategies involving immune checkpoint inhibitors and targeted drugs.
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页数:18
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