CLDN5 identified as a biomarker for metastasis and immune infiltration in gastric cancer via pan-cancer analysis

被引:0
|
作者
Han, Lu [1 ,2 ]
Cui, De -Jun [1 ]
Huang, Bo [1 ]
Yang, Qian [1 ]
Huang, Tao [2 ]
Lin, Guo-Yuan [2 ]
Chen, Shao-Jie [3 ]
机构
[1] Guizhou Prov Peoples Hosp, Dept Gastroenterol, Guiyang, Guizhou, Peoples R China
[2] Guizhou Med Univ, Dept Infect Dis, Affiliated Hosp, Guiyang, Guizhou, Peoples R China
[3] Guizhou Med Univ, Dept Hepatobiliary Surg, Affiliated Hosp, Guiyang, Guizhou, Peoples R China
来源
AGING-US | 2023年 / 15卷 / 11期
关键词
CLDN5; immune infiltrating; EMT; pan-cancer analysis; bioinformatics; TIGHT JUNCTION PROTEINS; BLOOD-BRAIN-BARRIER; CELL; PERMEABILITY; METHYLATION;
D O I
暂无
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Background: CLDN5 protein is essential for the formation of tight junctions in epithelial cells, and has been associated with epithelial-mesenchymal transition. Research has indicated that CLDN5 is associated with tumor metastasis, the tumor microenvironment, and immunotherapy in multiple types of cancer. Also, no comprehensive evaluation of the expression of CLDN5 and immunotherapy signatures through a pan-cancer analysis or immunoassay has been performed.Methods: We explored CLDN5's differential expression, survival analysis and clinicopathological staging through the TCGA database, and then corroborated the expression of CLDN5 by utilizing the GEO (Gene expression omnibus) database. To analyze CLDN5 KEGG, GO, and Hallmark mutations, as well as TIMER for immune infiltration, GSEA was utilized with ROC curve, mutation, and other factors such as survival, pathological stage, TME, MSI, TMB, immune cell infiltration, and DNA methylation. Immunohistochemistry was used to assess CLDN5 staining in gastric cancer tissues and paracancerous tissues. Visualization was done with R version 4.2.0 (http://www.rproject.org/).Results: According to TCGA database, CLDN5 expression levels differed significantly between cancer and normal tissues, and the GEO database (GSE49051 and GSE 64951) and tissue microarrays confirmed this result. Infiltrating cluster of differentiation 8+ (CD8+) T cells, CD4+ cells, neutrophils, dendritic cells, and macrophages revealed a correlation with CLDN5 expression. DNA methylation, TMB, and MSI are related to CLDN5 expression. Based on the ROC curve analysis, CLDN5 demonstrates outstanding diagnostic effectiveness for gastric cancer and is comparableConclusions: The findings suggest that CLDN5 is implicated in the oncogenesis of diverse cancer types, underscoring its potential significance in cancer biology. Notably, CLDN5 could have implications in immune filtration and immune checkpoint inhibitor therapies, however, further research is needed to confirm this.
引用
收藏
页码:5032 / 5051
页数:20
相关论文
共 50 条
  • [1] ANXA2 is a potential biomarker for cancer prognosis and immune infiltration: A systematic pan-cancer analysis
    Ning, Yijie
    Li, Yufei
    Wang, Hongqin
    [J]. FRONTIERS IN GENETICS, 2023, 14
  • [2] A Pan-cancer Analysis to Determine the Prognostic Analysis and Immune Infiltration of HSPA5
    Zhu, Rong-Kun
    Zhang, Wei
    Zhang, Yi-Xing
    Hui, Zeng
    Wang, Xiong-Wei
    [J]. CURRENT CANCER DRUG TARGETS, 2024, 24 (01) : 14 - 27
  • [3] Pan-cancer analysis reveals NAA50 as a cancer prognosis and immune infiltration-related biomarker
    Fang, Tao
    Wang, Dingxin
    Li, Rongyang
    Yu, Wenhao
    Tian, Hui
    [J]. FRONTIERS IN GENETICS, 2022, 13
  • [4] Comprehensive bioinformatics analysis of NOX4 as a biomarker for pan-cancer prognosis and immune infiltration
    Liu, Yuying
    Huang, Hua
    Yang, Xijun
    Huang, Danhe
    Wang, Xiongwei
    Yuan, Mingyu
    Hong, Lianqing
    [J]. AGING-US, 2024, 16 (08): : 7437 - 7447
  • [5] SERPINH1 is a Potential Prognostic Biomarker and Correlated With Immune Infiltration: A Pan-Cancer Analysis
    Wang, Yu
    Gu, Weigang
    Wen, Weiwei
    Zhang, Xiaofeng
    [J]. FRONTIERS IN GENETICS, 2022, 12
  • [6] TPD52 is a Potential Prognostic Biomarker and Correlated with Immune Infiltration: A Pan-cancer Analysis
    Miao, Lu
    Jing, Li
    Chen, Buze
    Zeng, Tian
    Chen, Youguo
    [J]. CURRENT MOLECULAR MEDICINE, 2024, 24 (11) : 1413 - 1425
  • [7] Pan-cancer analysis of DEPDC1 as a candidate prognostic biomarker and associated with immune infiltration
    Jia, Boquan
    Liu, Jun
    Hu, Xin
    Xia, Lu
    Han, Ying
    [J]. ANNALS OF TRANSLATIONAL MEDICINE, 2022, 10 (24)
  • [8] FAIM2 is a potential pan-cancer biomarker for prognosis and immune infiltration
    Cai, Jiayang
    Ye, Zhang
    Hu, Yuanyuan
    Wang, Yixuan
    Ye, Liguo
    Gao, Lun
    Sun, Qian
    Tong, Shiao
    Sun, Zhiqiang
    Yang, Ji'an
    Chen, Qianxue
    [J]. FRONTIERS IN ONCOLOGY, 2022, 12
  • [9] The pan-cancer analysis identified DIAPH3 as a diagnostic biomarker of clinical cancer
    Chen, Xiaowei
    Xie, Luhong
    Qiao, Kun
    Zhu, Xiaoyu
    Ren, Ji
    Tan, Yujie
    [J]. AGING-US, 2023, 15 (03): : 689 - 704
  • [10] Pan-Cancer and Single-Cell Analysis Reveals CENPL as a Cancer Prognosis and Immune Infiltration-Related Biomarker
    Feng, Ziyang
    Chen, Yu
    Cai, Changjing
    Tan, Jun
    Liu, Ping
    Chen, Yihong
    Shen, Hong
    Zeng, Shan
    Han, Ying
    [J]. FRONTIERS IN IMMUNOLOGY, 2022, 13