Interpretable machine learning-based individual analysis of acute kidney injury in immune checkpoint inhibitor therapy

被引:0
|
作者
Sakuragi, Minoru [1 ,2 ]
Uchino, Eiichiro [1 ,2 ]
Sato, Noriaki [1 ,2 ]
Matsubara, Takeshi [2 ]
Ueda, Akihiko [1 ,3 ]
Mineharu, Yohei [1 ,4 ,5 ]
Kojima, Ryosuke [1 ]
Yanagita, Motoko [2 ,6 ]
Okuno, Yasushi [1 ]
机构
[1] Kyoto Univ, Grad Sch Med, Dept Biomed Data Intelligence, Kyoto, Japan
[2] Kyoto Univ, Grad Sch Med, Dept Nephrol, Kyoto, Japan
[3] Kyoto Univ, Grad Sch Med, Dept Gynecol & Obstet, Kyoto, Japan
[4] Kyoto Univ, Grad Sch Med, Dept Neurosurg, Kyoto, Japan
[5] Kyoto Univ, Grad Sch Med, Dept Artificial Intelligence Healthcare & Med, Kyoto, Japan
[6] Kyoto Univ, Inst Adv Study Human Biol ASHBi, Kyoto, Japan
来源
PLOS ONE | 2024年 / 19卷 / 03期
关键词
AKI;
D O I
10.1371/journal.pone.0298673
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Background Acute kidney injury (AKI) is a critical complication of immune checkpoint inhibitor therapy. Since the etiology of AKI in patients undergoing cancer therapy varies, clarifying underlying causes in individual cases is critical for optimal cancer treatment. Although it is essential to individually analyze immune checkpoint inhibitor-treated patients for underlying pathologies for each AKI episode, these analyses have not been realized. Herein, we aimed to individually clarify the underlying causes of AKI in immune checkpoint inhibitor-treated patients using a new clustering approach with Shapley Additive exPlanations (SHAP).Methods We developed a gradient-boosting decision tree-based machine learning model continuously predicting AKI within 7 days, using the medical records of 616 immune checkpoint inhibitor-treated patients. The temporal changes in individual predictive reasoning in AKI prediction models represented the key features contributing to each AKI prediction and clustered AKI patients based on the features with high predictive contribution quantified in time series by SHAP. We searched for common clinical backgrounds of AKI patients in each cluster, compared with annotation by three nephrologists.Results One hundred and twelve patients (18.2%) had at least one AKI episode. They were clustered per the key feature, and their SHAP value patterns, and the nephrologists assessed the clusters' clinical relevance. Receiver operating characteristic analysis revealed that the area under the curve was 0.880. Patients with AKI were categorized into four clusters with significant prognostic differences (p = 0.010). The leading causes of AKI for each cluster, such as hypovolemia, drug-related, and cancer cachexia, were all clinically interpretable, which conventional approaches cannot obtain.Conclusion Our results suggest that the clustering method of individual predictive reasoning in machine learning models can be applied to infer clinically critical factors for developing each episode of AKI among patients with multiple AKI risk factors, such as immune checkpoint inhibitor-treated patients.
引用
收藏
页数:14
相关论文
共 50 条
  • [1] ACUTE KIDNEY INJURY ASSOCIATED WITH IMMUNE CHECKPOINT INHIBITOR THERAPY: REPORT OF 4 CASES
    Sardeli, Angeliki
    Petrou, Dimitra
    Kalogeropoulos, Petros
    Nikolopoulos, Petros
    Liapis, George
    Lionaki, Sophia
    [J]. NEPHROLOGY DIALYSIS TRANSPLANTATION, 2023, 38 : I333 - I333
  • [3] Acute kidney injury from immune checkpoint inhibitor use
    Gordon, Lexis
    Dokouhaki, Pouneh
    Hagel, Kimberly
    Prasad, Bhanu
    [J]. BMJ CASE REPORTS, 2019, 12 (10)
  • [4] Machine learning-based predictors for immune checkpoint inhibitor therapy of non-small-cell lung cancer
    Wiesweg, M.
    Mairinger, F.
    Reis, H.
    Goetz, M.
    Walter, R. F. H.
    Hager, T.
    Metzenmacher, M.
    Eberhardt, W. E. E.
    McCutcheon, A.
    Koester, J.
    Stuschke, M.
    Aigner, C.
    Darwiche, K.
    Schmid, K. W.
    Rahmann, S.
    Schuler, M.
    [J]. ANNALS OF ONCOLOGY, 2019, 30 (04) : 655 - 657
  • [5] Bibliometric and visual analysis of machine learning-based research in acute kidney injury worldwide
    Yu, Xiang
    Wu, RiLiGe
    Ji, YuWei
    Feng, Zhe
    [J]. FRONTIERS IN PUBLIC HEALTH, 2023, 11
  • [6] Analysis of a machine learning-based risk stratification scheme for acute kidney injury in vancomycin
    Mu, Fei
    Cui, Chen
    Tang, Meng
    Guo, Guiping
    Zhang, Haiyue
    Ge, Jie
    Bai, Yujia
    Zhao, Jinyi
    Cao, Shanshan
    Wang, Jingwen
    Guan, Yue
    [J]. FRONTIERS IN PHARMACOLOGY, 2022, 13
  • [7] Acute kidney injury associated with immune checkpoint inhibitor therapy: incidence, risk factors and outcomes
    Meraz-Munoz, Alejandro
    Amir, Eitan
    Ng, Pamela
    Avila-Casado, Carmen
    Ragobar, Claire
    Chan, Christopher
    Kim, Joseph
    Wald, Ron
    Kitchlu, Abhijat
    [J]. JOURNAL FOR IMMUNOTHERAPY OF CANCER, 2020, 8 (01)
  • [8] Mortality after acute kidney injury and acute interstitial nephritis in patients prescribed immune checkpoint inhibitor therapy
    Baker, Megan L.
    Yamamoto, Yu
    Perazella, Mark A.
    Dizman, Nazli
    Shirali, Anushree C.
    Hafez, Navid
    Weinstein, Jason
    Simonov, Michael
    Testani, Jeffrey M.
    Kluger, Harriet M.
    Cantley, Lloyd G.
    Parikh, Chirag R.
    Wilson, F. Perry
    Moledina, Dennis G.
    [J]. JOURNAL FOR IMMUNOTHERAPY OF CANCER, 2022, 10 (03)
  • [9] Short-term steroid therapy for immune-checkpoint-inhibitor-related acute kidney injury
    Tanemoto, Masayuki
    Iida, Yoshito
    Kasai, Takahiro
    [J]. INTERNATIONAL UROLOGY AND NEPHROLOGY, 2024, 56 (03) : 1199 - 1200
  • [10] Short-term steroid therapy for immune-checkpoint-inhibitor-related acute kidney injury
    Masayuki Tanemoto
    Yoshito Iida
    Takahiro Kasai
    [J]. International Urology and Nephrology, 2024, 56 : 1199 - 1200