Parkinson's Disease Diagnosis Using miRNA Biomarkers and Deep Learning

被引:1
|
作者
Kumar, Alex [1 ]
Kouznetsova, Valentina L. [2 ,3 ,4 ]
Kesari, Santosh [5 ]
Tsigelny, Igor F. [2 ,3 ,4 ,6 ]
机构
[1] Univ Calif San Diego, San Diego Supercomp Ctr, REHS Program, La Jolla, CA 92093 USA
[2] Univ Calif San Diego, San Diego Supercomp Ctr, La Jolla, CA 92093 USA
[3] BiAna, La Jolla, CA 92038 USA
[4] CureSci Inst, San Diego, CA 92121 USA
[5] Pacific Neurosci Inst, Santa Monica, CA 90404 USA
[6] Univ Calif San Diego, Dept Neurosci, La Jolla, CA 92093 USA
来源
FRONTIERS IN BIOSCIENCE-LANDMARK | 2024年 / 29卷 / 01期
关键词
machine learning; Parkinson's disease; miRNA biomarkers; neural networks; deep learning;
D O I
10.31083/j.fbl2901004
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Background: The current standard for Parkinson's disease (PD) diagnosis is often imprecise and expensive. However, the dysregulation patterns of microRNA (miRNA) hold potential as a reliable and effective non-invasive diagnosis of PD. Methods: We use data mining to elucidate new miRNA biomarkers and then develop a machine-learning (ML) model to diagnose PD based on these biomarkers. Results: The best-performing ML model, trained on filtered miRNA dysregulated in PD, was able to identify miRNA biomarkers with 95.65% accuracy. Through analysis of miRNA implicated in PD, thousands of descriptors reliant on gene targets were created that can be used to identify novel biomarkers and strengthen PD diagnosis. Conclusions: The developed ML model based on miRNAs and their genomic pathway descriptors achieved high accuracies for the prediction of PD.
引用
收藏
页数:11
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