Development of machine learning-based predictors for early diagnosis of hepatocellular carcinoma

被引:0
|
作者
Zhang, Zi-Mei [1 ]
Huang, Yuting [1 ]
Liu, Guanghao [2 ,3 ]
Yu, Wenqi [1 ]
Xie, Qingsong [1 ]
Chen, Zixi [1 ]
Huang, Guanda [1 ]
Wei, Jinfen [1 ]
Zhang, Haibo [1 ]
Chen, Dong [4 ]
Du, Hongli [1 ]
机构
[1] South China Univ Technol, Sch Biol & Biol Engn, Guangzhou, Peoples R China
[2] Fujian Med Univ, Sch Basic Med Sci, Key Lab, Minist Educ Gastrointestinal Canc, Fuzhou 350122, Peoples R China
[3] Fujian Med Univ, Sch Med Technol & Engn, Dept Bioinformat, Fujian Key Lab Med Bioinformat, Fuzhou 350122, Peoples R China
[4] South China Univ Technol, Fangrui Inst Innovat Drugs, Guangzhou, Peoples R China
基金
国家重点研发计划;
关键词
QUALITATIVE TRANSCRIPTIONAL SIGNATURE; PATHOLOGICAL DIAGNOSIS; DEPENDENCY;
D O I
10.1038/s41598-024-51265-7
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Hepatocellular carcinoma (HCC) remains a formidable malignancy that significantly impacts human health, and the early diagnosis of HCC holds paramount importance. Therefore, it is imperative to develop an efficacious signature for the early diagnosis of HCC. In this study, we aimed to develop early HCC predictors (eHCC-pred) using machine learning-based methods and compare their performance with existing methods. The enhancements and advancements of eHCC-pred encompassed the following: (i) utilization of a substantial number of samples, including an increased representation of cirrhosis tissues without HCC (CwoHCC) samples for model training and augmented numbers of HCC and CwoHCC samples for model validation; (ii) incorporation of two feature selection methods, namely minimum redundancy maximum relevance and maximum relevance maximum distance, along with the inclusion of eight machine learning-based methods; (iii) improvement in the accuracy of early HCC identification, elevating it from 78.15 to 97% using identical independent datasets; and (iv) establishment of a user-friendly web server. The eHCC-pred is freely accessible at http://www.dulab.com.cn/eHCC-pred/. Our approach, eHCC-pred, is anticipated to be robustly employed at the individual level for facilitating early HCC diagnosis in clinical practice, surpassing currently available state-of-the-art techniques.
引用
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页数:11
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