Prostate cancer genetic risk and associated aggressive disease inmen of African ancestry

被引:2
|
作者
Soh, Pamela X. Y. [1 ]
Mmekwa, Naledi [2 ]
Petersen, Desiree C. [3 ]
Gheybi, Kazzem [1 ]
van Zyl, Smit [4 ]
Jiang, Jue [1 ]
Patrick, Sean M. [2 ]
Campbell, Raymond [5 ]
Jaratlerdseri, Weerachai [1 ]
Mutambirwa, Shingai B. A. [6 ]
Bornman, M. S. Riana [2 ]
Hayes, Vanessa M. [1 ,2 ,4 ,7 ]
机构
[1] Univ Sydney, Sch Med Sci, Fac Med & Hlth, Charles Perkins Ctr,Ancestry & Hlth Genom Lab, Camperdown, NSW 2006, Australia
[2] Univ Pretoria, Sch Hlth Syst & Publ Hlth, Pretoria, South Africa
[3] Stellenbosch Univ, Fac Med & Hlth Sci, Div Mol Biol & Human Genet, South African Med Res Council Ctr TB Res, Cape Town, South Africa
[4] Univ Limpopo, Fac Hlth Sci, Turfloop Campus, Polokwane, South Africa
[5] Phulukisa Hlth Care, Pretoria, South Africa
[6] Sefako Makgatho Hlth Sci Univ, Dr George Mukhari Acad Hosp, Dept Urol, Medunsa, South Africa
[7] Univ Manchester, Manchester Canc Res Ctr, Manchester M20 4GJ, Lancs, England
基金
英国医学研究理事会;
关键词
GENOME-WIDE ASSOCIATION; CLINICAL PRESENTATION; SUSCEPTIBILITY LOCI; EXPRESSION; KLF5; HOXB13; MEN; PROGRESSION; RESISTANCE; MUTATIONS;
D O I
10.1038/s41467-023-43726-w
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
African ancestry is a significant risk factor for prostate cancer and advanced disease. Yet, genetic studies have largely been conducted outside the context of Sub-Saharan Africa, identifying 278 common risk variants contributing to a multiethnic polygenic risk score, with rare variants focused on a panel of roughly 20 pathogenic genes. Based on this knowledge, we are unable to determine polygenic risk or differentiate prostate cancer status interrogating whole genome data for 113 Black South African men. To further assess for potentially functional common and rare variant associations, here we interrogate 247,780 exomic variants for 798 Black South African men using a case versus control or aggressive versus non-aggressive study design. Notable genes of interest include HCP5, RFX6 and H3C1 for risk, and MKI67 and KLF5 for aggressive disease. Our study highlights the need for further inclusion across the African diaspora to establish African-relevant risk models aimed at reducing prostate cancer health disparities.
引用
收藏
页数:14
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