The complete plastid genome sequence of Lysidice brevicalyx (Fabaceae: Detarioideae), an arbor species endemic to China

被引:0
|
作者
Li, Jian-Xin [1 ,2 ,3 ]
Meng, Ying [1 ]
Nie, Ze-Long [1 ]
Tu, Tie-Yao [2 ,3 ]
机构
[1] Jishou Univ, Coll Biol & Environm Sci, Jishou 416000, Hunan, Peoples R China
[2] Chinese Acad Sci, Plant Sci Ctr, South China Bot Garden, Guangzhou, Peoples R China
[3] South China Natl Bot Garden, Guangzhou, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2023年 / 8卷 / 09期
基金
中国国家自然科学基金;
关键词
Phylogenetic analysis; plastid genome; Fabales; Lysidice; Leguminosae; COMPLETE CHLOROPLAST GENOME; GLYCOSIDES; EVOLUTION; ROOTS;
D O I
10.1080/23802359.2023.2259041
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The plastid genome of Lysidice brevicalyx was successfully assembled using Illumina sequencing reads for the first time. The complete plastid genome of L. brevicalyx is a circular structure of 159,084 bp with a GC content of 36.4%. It comprises a large single-copy (LSC) region of 87,783 bp, a small single-copy (SSC) region of 19,557 bp, and two inverted repeat regions (IRA and IRB) of 25,872 bp, each. The plastome of L. brevicalyx contains a total of 128 genes, including 83 protein-coding genes, 37 tRNAs, and 8 rRNAs. The phylogenetic analysis strongly supports the monophyly of Lysidice. This study provides the first complete plastid genome sequence of L. brevicalyx and contributes to our understanding of the molecular characteristics and evolutionary relationships of this plant species.
引用
收藏
页码:1003 / 1006
页数:4
相关论文
共 50 条
  • [1] The complete plastid genome sequence of Aconitum brachypodum (Ranunculaceae): an Endangered species endemic to China
    Meng, Jing
    Zhang, Linna
    Li, Xuepei
    He, Jun
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01): : 130 - 131
  • [2] The complete chloroplast genome of Ormosia nuda (fabaceae), an endemic species in China
    Wang, Yin-Huan
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (07): : 2095 - 2096
  • [3] Complete plastid genome of Lespedeza tricolor (Fabaceae), an endemic shrub in Korea
    Kim, Tae-Hee
    Kim, Sang-Chul
    Ha, Young-Ho
    Choi, Kyung
    Kim, Hyuk-Jin
    MITOCHONDRIAL DNA PART B-RESOURCES, 2022, 7 (10): : 1800 - 1802
  • [4] Complete plastid genome of the endangered species Paraisometrum mileense (Gesneriaceae) endemic to China
    Meng, Jing
    Zhang, Linna
    He, Jun
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 3585 - 3586
  • [5] Characterization of the complete plastid genome of Acer tsinglingense, an endemic tree species in China
    Dong, Peng-Bin
    Liu, Yu
    Gao, Qi-Yuan
    Yang, Ting
    Chen, Xue-Yi
    Yang, Jia-Yu
    Shang, Qian-Han
    Fang, Min-Feng
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 4065 - 4066
  • [6] Characterization of the DNA molecular sequence of complete plastid genome of Paeonia rockii subsp. taibaishanica, an endemic species in China
    Dong, Peng-Bin
    Zhang, Li
    Lu, Zhao-Ping
    Wang, Yuan
    Song, Xiao-Yu
    Wang, Jiu-Xia
    He, Dan
    Lei, Xiao-Feng
    Wang, Ma-Li
    Fang, Min-Feng
    Li, Zhong-Hu
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (09): : 2628 - 2629
  • [7] The complete chloroplast genome sequence of Sapindus delavayi, a species endemic to China
    Wang, Xuyang
    Wang, Lianchun
    Liu, Huimin
    Wang, Dawei
    Li, Qing
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (07): : 1906 - 1908
  • [8] The complete plastid genome sequence of Chrysanthemum lucidum (Asteraceae): an endemic species of Ulleung Island of Korea
    Kim, Jung Sung
    Lee, Woong
    Pak, Jae-Hong
    MITOCHONDRIAL DNA PART B-RESOURCES, 2018, 3 (02): : 476 - 477
  • [9] The complete plastid genome sequence of Peucedanum hakuunense Nakai (Apiaceae), an endemic and rare species in Korea
    Joh, Ho Jun
    Park, Hyun-Seung
    Kang, Jong-Soo
    Park, Jee Young
    Yang, Tae-Jin
    MITOCHONDRIAL DNA PART B-RESOURCES, 2022, 7 (05): : 766 - 768
  • [10] The complete plastid genome sequence of Neopicrorhiza scrophulariiflora (Plantaginaceae): an endangered species endemic to The Himalayas regions
    Zhang, Ying-Min
    Qian, Zi-Gang
    Zhang, Ai-Li
    Yang, Cong-Wei
    Li, Guo-Dong
    Liu, Xiao-Li
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 2504 - 2505