A novel subject-wise dictionary learning approach using multi-subject fMRI spatial and temporal components

被引:2
|
作者
Khalid, Muhammad Usman [1 ]
Nauman, Malik Muhammad [2 ]
机构
[1] Imam Mohammad Ibn Saud Islamic Univ, Coll Comp & Informat Sci, Riyadh 11564, Saudi Arabia
[2] Univ Brunei Darussalam, Fac Integrated Technol, BE-1410 Bandar Seri Begawan, Brunei
关键词
FUNCTIONAL MRI DATA; TASK-FMRI; K-SVD; SPARSE; ALGORITHMS; ACTIVATION; SEPARATION; MODEL;
D O I
10.1038/s41598-023-47420-1
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The conventional dictionary learning (DL) algorithms aim to adapt the dictionary/sparse code to individual functional magnetic resonance imaging (fMRI) data. Thus, lacking the capability to consolidate the spatiotemporal diversities offered by other subjects. Considering that subject-wise (sw) data matrix can be decomposed into the sparse linear combination of multi-subject (MS) time courses and MS spatial maps, two new algorithms, sw sequential DL (swsDL) and sw block DL (swbDL), have been proposed. They are based on the novel framework, defined by the mixing model, where base matrices prepared by operating a computationally fast sparse spatiotemporal blind source separation method over multiple subjects are employed to adapt the mixing matrices to sw training data. They solve the optimization models formulated using l(0)/l(1)-norm penalization/constraints through dictionary/sparse code pair update and alternating minimization approach. They are unique because no existing sparse DL method can incorporate MS spatiotemporal components while updating sw atoms/sparse codes, which can eventually be assembled using neuroscience knowledge to extract group-level dynamics. Various fMRI datasets are used to evaluate and compare the performance of the proposed algorithms with existing state-of-the-art algorithms. Specifically, overall, a 14% increase in the mean correlation value and 39% reduction in the mean computation time exhibited by swsDL and swbDL, respectively, over the adaptive consistent sequential dictionary algorithm.
引用
收藏
页数:21
相关论文
共 45 条
  • [1] A novel subject-wise dictionary learning approach using multi-subject fMRI spatial and temporal components
    Muhammad Usman Khalid
    Malik Muhammad Nauman
    [J]. Scientific Reports, 13
  • [2] Robust Subject-Wise Dictionary Learning for fMRI
    Khalid, Muhammad Usman
    Albahlal, Bader M.
    [J]. IEEE ACCESS, 2024, 12 : 35957 - 35971
  • [3] DICTIONARY LEARNING ALGORITHM FOR MULTI-SUBJECT FMRI ANALYSIS VIA TEMPORAL AND SPATIAL CONCATENATION
    Iqbal, Asif
    Seghouane, Abd-Krim
    [J]. 2018 IEEE INTERNATIONAL CONFERENCE ON ACOUSTICS, SPEECH AND SIGNAL PROCESSING (ICASSP), 2018, : 2751 - 2755
  • [4] A dictionary learning algorithm for multi-subject fMRI analysis based on a hybrid concatenation scheme
    Iqbal, Asif
    Seghouane, Abd-Krim
    [J]. DIGITAL SIGNAL PROCESSING, 2018, 83 : 249 - 260
  • [5] MULTI-SUBJECT fMRI CONNECTIVITY ANALYSIS USING SPARSE DICTIONARY LEARNING AND MULTISET CANONICAL CORRELATION ANALYSIS
    Khalid, Muhammad Usman
    Seghouane, Abd-Krim
    [J]. 2015 IEEE 12TH INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING (ISBI), 2015, : 683 - 686
  • [6] CSMSDL: A COMMON SEQUENTIAL DICTIONARY LEARNING ALGORITHM FOR MULTI-SUBJECT FMRI DATA SETS ANALYSIS
    Seghouane, Abd-Krim
    Iqbal, Asif
    [J]. 2017 24TH IEEE INTERNATIONAL CONFERENCE ON IMAGE PROCESSING (ICIP), 2017, : 4113 - 4117
  • [7] Activation detection in multi-subject studies of fMRI using GLRT
    Shams, SM
    Hossein-Zadeh, GA
    Soltanian-Zadeh, H
    [J]. 2004 IEEE NUCLEAR SCIENCE SYMPOSIUM CONFERENCE RECORD, VOLS 1-7, 2004, : 2778 - 2782
  • [8] LEARNING SHARED NEURAL MANIFOLDS FROM MULTI-SUBJECT FMRI DATA
    Huang, Jessie
    Busch, Erica
    Wallenstein, Tom
    Gerasimiuk, Michal
    Benz, Andrew
    Lajoie, Guillaume
    Wolf, Guy
    Turk-Browne, Nicholas
    Krishnaswamy, Smita
    [J]. 2022 IEEE 32ND INTERNATIONAL WORKSHOP ON MACHINE LEARNING FOR SIGNAL PROCESSING (MLSP), 2022,
  • [9] Multi-subject Dictionary Learning to Segment an Atlas of Brain Spontaneous Activity
    Varoquaux, Gael
    Gramfort, Alexandre
    Pedregosa, Fabian
    Michel, Vincent
    Thirion, Bertrand
    [J]. INFORMATION PROCESSING IN MEDICAL IMAGING, 2011, 6801 : 562 - 573
  • [10] Nonparametric inference of the hemodynamic response using multi-subject fMRI data
    Zhang, Tingting
    Li, Fan
    Beckes, Lane
    Brown, Casey
    Coan, James A.
    [J]. NEUROIMAGE, 2012, 63 (03) : 1754 - 1765