Synthesis, Crystal Structure, Hirshfeld Surface Analysis, DNA/BSA Interaction and Molecular Docking Studies of 2-(6-(4-chlorophenyl)-1,2,4-triazin-3-yl)quinoline

被引:3
|
作者
Gokturk, Tolga [1 ]
Zengin, Talip [2 ]
Hokelek, Tuncer [3 ]
Topkaya, Cansu Gokce [1 ]
Gup, Ramazan [1 ]
机构
[1] Mugla Sitki Kocman Univ, Dept Chem, TR-48000 Mugla, Turkiye
[2] Mugla Sitki Kocman Univ, Dept Mol Biol & Genet, TR-48000 Mugla, Turkiye
[3] Hacettepe Univ, Dept Phys, TR-06800 Ankara, Turkiye
关键词
4-triazine; Hirshfeld surface analysis; DNA binding; BSA binding; Molecular docking; BOVINE SERUM-ALBUMIN; IN-VITRO CYTOTOXICITY; CALF THYMUS DNA; INTERMOLECULAR INTERACTIONS; PROTEIN-BINDING; ANTICANCER ACTIVITY; 1,2,4-TRIAZINE MOIETY; BIOLOGICAL EVALUATION; QUANTITATIVE-ANALYSIS; COPPER(II) COMPLEXES;
D O I
10.1016/j.molstruc.2023.136128
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
We reported herein a new 1,2,4-triazine derivative, 2-(6-(4-chlorophenyl)-1,2,4-triazin-3-yl)quinoline, synthesized by cyclization of p-chloro isonitrosophenylhydrazine with 2-quinolinecarboxaldehyde. Its structure was elucidated by FTIR, 1H NMR, 13C APT NMR, elemental analyses, and also its molecular and crystal structures were determined by single crystal X-ray analysis which revealed that the compound was crystallized in monoclinic system P 2/c space group with a = 17.2564 (6) & ANGS;, b = 6.0419 (3) & ANGS;, c = 14.4093 (5) & ANGS;, & beta; = 103.469 (3)degrees, Z = 4 and V = 1461.01 (10) & ANGS;3. The Hirshfeld surface analysis of the crystal structure indicated that the most important contributions for the crystal packing were from H ... H (29.2%), H ... C/C ... H (22.3%), H ... N/CN ... H (16.1%) and H ... CI/CI ... H (14.5%) interactions. Hydrogen bonding and van der Waals interactions were the dominant interactions in the crystal packing. The evaluation of the electrostatic, dispersion and total energy frameworks indicated that the stabilization was dominated via the dispersion energy contribution. The synthesized compound was investigated for CT-DNA and BSA binding activity using various in vitro and in silico techniques. Results were revealed that binding of the compound with CT-DNA via minor groove and with BSA via subdomain IIIB.
引用
收藏
页数:15
相关论文
共 50 条
  • [1] Crystal structure and Hirshfeld surface analysis of 6-((E)-2-{4-[2-(4-chlorophenyl)-2-oxoethoxy]pnen-yl}ethenyl)-4,5-dihyciropyrudazin-3(2H)-one
    Daoui, Said
    Muwafaq, Israa
    Cinar, Emine Berrin
    Abudunia, Abdulmalik
    Dege, Necmi
    Benchat, Noureddine
    Karrouchi, Khalid
    ACTA CRYSTALLOGRAPHICA SECTION E-CRYSTALLOGRAPHIC COMMUNICATIONS, 2022, 78 : 8 - +
  • [2] 2-[(4-Chlorophenyl)sulfanyl]-2-methoxy-1-phenyl-ethan-1-one: crystal structure and Hirshfeld surface analysis
    Caracelli, Ignez
    Zukerman-Schpector, Julio
    Traesel, Henrique J.
    Olivato, Paulo R.
    Jotani, Mukesh M.
    Tiekink, Edward R. T.
    ACTA CRYSTALLOGRAPHICA SECTION E-CRYSTALLOGRAPHIC COMMUNICATIONS, 2018, 74 : 703 - +
  • [3] Synthesis, molecular docking and α-glucosidase inhibition of 2-((5,6-diphenyl-1,2,4-triazin-3-yl)thio)-N-arylacetamides
    Wang, Guangcheng
    Li, Xin
    Wang, Jing
    Xie, Zhenzhen
    Li, Luyao
    Chen, Ming
    Chen, Shan
    Peng, Yaping
    BIOORGANIC & MEDICINAL CHEMISTRY LETTERS, 2017, 27 (05) : 1115 - 1118
  • [4] Synthesis, crystal structure and Hirshfeld surface analysis of 2-{4-[(2-chlorophenyl)methyl]-3-methyl-6-oxopyridazin-1-yl}-N-phenylacetamide
    Assila, Hamza
    Zaoui, Younes
    Mubengayi, Camille Kalonji
    Guerrab, Walid
    Alsubari, Abdulsalam
    Mague, Joel T.
    Ramli, Youssef
    Ansar, Mhammed
    ACTA CRYSTALLOGRAPHICA SECTION E-CRYSTALLOGRAPHIC COMMUNICATIONS, 2024, 80 : 1221 - +
  • [5] Synthesis, crystal structure, Hirshfeld surface analysis, DFT, molecular docking and molecular dynamic simulation studies of (E)-2,6-bis(4-chlorophenyl)-3-methyl-4-(2-(2,4,6-trichlorophenyl)hydrazono)piperidine derivatives
    Anthony, L. Athishu
    Rajaraman, D.
    Sundararajan, G.
    Suresh, M.
    Nethaji, P.
    Jaganathan, R.
    Poomani, Kumaradhas
    Journal of Molecular Structure, 2022, 1266
  • [6] Synthesis, crystal structure, Hirshfeld surface analysis, DFT, molecular docking and molecular dynamic simulation studies of (E)-2,6-bis(4-chlorophenyl)-3-methyl-4-(2-(2,4,6-trichlorophenyl)hydrazono)piperidine derivatives
    Anthony, L. Athishu
    Rajaraman, D.
    Sundararajan, G.
    Suresh, M.
    Nethaji, P.
    Jaganathan, R.
    Poomani, Kumaradhas
    JOURNAL OF MOLECULAR STRUCTURE, 2022, 1266
  • [7] 2-[3-(4-Chlorophenyl)-1,2,4-oxadiazol-5-yl]phenol
    Ding, Wei-Lin
    Shen, Yong-Mei
    Xing, Zhi-Tao
    Wang, Pin-Liang
    Wang, Hai-Bo
    ACTA CRYSTALLOGRAPHICA SECTION E-STRUCTURE REPORTS ONLINE, 2006, 62 : O5592 - O5593
  • [8] Crystal structure, Hirshfeld surface analysis, and DFT and molecular docking studies of 6-cyanonaphthalen-2-yl 4-(benzyloxy)benzoate
    Kumar, Mahadevaiah Harish
    Kumar, Shivakumar Santhosh
    Devarajegowda, Hirehalli Chikkegowda
    Srinivasa, Hosapalya Thimmaiah
    Palakshamurthy, Bandrehalli Siddagangaiah
    ACTA CRYSTALLOGRAPHICA SECTION E-CRYSTALLOGRAPHIC COMMUNICATIONS, 2024, 80 : 1180 - +
  • [9] Synthesis, crystal structure, density functional theory, Hirshfeld surface analysis and molecular docking studies of 2-(2-phenylanthracen-9-yl)thiophene derivatives
    Manickam, R.
    Jagadeesan, G.
    Srinivasan, G.
    INDIAN JOURNAL OF CHEMISTRY SECTION B-ORGANIC CHEMISTRY INCLUDING MEDICINAL CHEMISTRY, 2021, 60 (03): : 439 - 445
  • [10] Crystal structure of 2-(4-chlorophenyl)-4-(1H-indol-3-yl)-6-phenylpyridine-3-carbonitrile
    Vishnupriya, R.
    Suresh, J.
    Gunasekaran, Pethaiah
    Perumal, Subbu
    Lakshman, P. L. Nilantha
    ACTA CRYSTALLOGRAPHICA SECTION E-CRYSTALLOGRAPHIC COMMUNICATIONS, 2014, 70 : O978 - +