In silico and in vitro approaches allow the identification of the Prosystemin molecular network

被引:3
|
作者
Natale, Roberto [1 ,3 ]
Coppola, Mariangela [1 ]
D'Agostino, Nunzio [1 ]
Zhang, Youjun [2 ,3 ]
Fernie, Alisdair Robert [2 ,3 ]
Castaldi, Valeria [1 ]
Rao, Rosa [1 ,4 ]
机构
[1] Univ Naples Federico II, Dept Agr Sci, I-80055 Portici, Italy
[2] Ctr Plant Syst Biol & Biotechnol, Plovdiv 4000, Bulgaria
[3] Max Planck Inst Mol Pflanzenphysiol, D-14476 Potsdam, Germany
[4] Univ Naples Federico II, Interuniv Ctr Studies Bioinspired Agroenvironm Tec, BAT Ctr, I-80055 Portici, Italy
关键词
Protein-protein interaction; Prosystemin interactors; PURIFICATION-MASS SPECTROMETRY; PROTEIN-PROTEIN INTERACTION; SERINE THREONINE KINASES; DNA-BINDING PROTEINS; PLANT-RESPONSES; SALICYLIC-ACID; DELTA(1)-PYRROLINE-5-CARBOXYLATE SYNTHETASE; TRANSCRIPTION FACTORS; ENHANCES RESISTANCE; SYSTEMIN RECEPTOR;
D O I
10.1016/j.csbj.2022.12.006
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Tomato Prosystemin (ProSys), the precursor of Systemin, a small peptidic hormone, is produced at very low concentration in unchallenged plants, while its expression greatly increases in response to several different stressors triggering an array of defence responses. The molecular mechanisms that underpin such a wide array of defence barriers are not fully understood and are likely correlated with the intrin-sically disordered (ID) structure of the protein. ID proteins interact with different protein partners form-ing complexes involved in the modulation of different biological mechanisms. Here we describe the ProSys-protein network that shed light on the molecular mechanisms underpinning ProSys associated defence responses. Three different approaches were used. In silico prediction resulted in 98 direct inter -actors, most clustering in phytohormone biosynthesis, transcription factors and signal transduction gene classes. The network shows the central role of ProSys during defence responses, that reflects its role as central hub. In vitro ProSys interactors, identified by Affinity Purification-Mass Spectrometry (AP-MS), revealed over three hundred protein partners, while Bimolecular Fluorescent Complementation (BiFC) experiments validated in vivo some interactors predicted in silico and in vitro. Our results demonstrate that ProSys interacts with several proteins and reveal new key molecular events in the ProSys-dependent defence response of tomato plant.(c) 2022 Published by Elsevier B.V. on behalf of Research Network of Computational and Structural Bio-technology. This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/ licenses/by-nc-nd/4.0/).
引用
收藏
页码:212 / 223
页数:12
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