Whole-genome sequencing based homologous recombination deficiency testing for precision oncology of breast cancers

被引：0
|
作者：
Kim, Ryul
Park, Seongyeol
Lim, Joonoh
Yi, Boram
Koo, Jaemo
Lee, Sangmoon
Lee, Jeong Seok
Park, Yeon Hee
Ju, Young Seok
机构：
来源：
CANCER RESEARCH | 2023年 / 83卷 / 07期
关键词：
D O I：
10.1158/1538-7445.AM2023-239
中图分类号：
R73 [肿瘤学];
学科分类号：
100214 ;
摘要：
239
引用
收藏
页数：2
相关论文
共 50 条
  • [1] Whole-genome Sequencing Analysis of Metaplastic Breast Cancers Shows Infrequent Homologous Recombination Deficiency
    Bhaloo, Shirin
    Gazzo, Andrea
    Paula, Arnaud Da Cruz
    da Silva, Edaise M.
    Selenica, Pier
    Zhu, Yingjie
    Blanco-Heredia, Juan
    Pei, Xin
    Patel, Juber
    Wen, Hannah
    Riaz, Nadeem
    Powell, Simon
    Chandarlapaty, Sarat
    Norton, Larry
    Brown, David
    Weigelt, Britta
    Pareja, Fresia
    Reis-Filho, Jorge
    [J]. LABORATORY INVESTIGATION, 2023, 103 (03) : S102 - S103
  • [2] Homologous recombination deficiency derived from whole-genome sequencing predicts platinum response in triple-negative breast cancers
    Petra ter Brugge
    Sarah C. Moser
    Ivan Bièche
    Petra Kristel
    Sabrina Ibadioune
    Alexandre Eeckhoutte
    Roebi de Bruijn
    Eline van der Burg
    Catrin Lutz
    Stefano Annunziato
    Julian de Ruiter
    Julien Masliah Planchon
    Sophie Vacher
    Laura Courtois
    Rania El-Botty
    Ahmed Dahmani
    Elodie Montaudon
    Ludivine Morisset
    Laura Sourd
    Léa Huguet
    Heloise Derrien
    Fariba Nemati
    Sophie Chateau-Joubert
    Thibaut Larcher
    Anne Salomon
    Didier Decaudin
    Fabien Reyal
    Florence Coussy
    Tatiana Popova
    Jelle Wesseling
    Marc-Henri Stern
    Jos Jonkers
    Elisabetta Marangoni
    [J]. Nature Communications, 14
  • [3] Homologous recombination deficiency derived from whole-genome sequencing predicts platinum response in triple-negative breast cancers
    ter Brugge, Petra
    Moser, Sarah C.
    Bieche, Ivan
    Kristel, Petra
    Ibadioune, Sabrina
    Eeckhoutte, Alexandre
    de Bruijn, Roebi
    van der Burg, Eline
    Lutz, Catrin
    Annunziato, Stefano
    de Ruiter, Julian
    Planchon, Julien Masliah
    Vacher, Sophie
    Courtois, Laura
    El-Botty, Rania
    Dahmani, Ahmed
    Montaudon, Elodie
    Morisset, Ludivine
    Sourd, Laura
    Huguet, Lea
    Derrien, Heloise
    Nemati, Fariba
    Chateau-Joubert, Sophie
    Larcher, Thibaut
    Salomon, Anne
    Decaudin, Didier
    Reyal, Fabien
    Coussy, Florence
    Popova, Tatiana
    Wesseling, Jelle
    Stern, Marc-Henri
    Jonkers, Jos
    Marangoni, Elisabetta
    [J]. NATURE COMMUNICATIONS, 2023, 14 (01)
  • [4] Whole-genome sequencing based assessment of HER2 focal amplification for precision oncology of breast cancers
    Kim, Ryul
    Lim, Joonoh
    Park, Hansol
    Park, Seongyeol
    Oh, Baek-Lok
    Lee, Sangmoon
    Kim, Ji-Yeon
    Nam, Seok Jin
    Kim, Seok Won
    Lee, Jeong Eon
    Yu, Jonghan
    Ryu, Ji In
    Lee, Jeong Seok
    Kwon, Minsuk
    Lee, Jeongmin
    Park, Yeon Hee
    Ju, Young Seok
    [J]. JOURNAL OF CLINICAL ONCOLOGY, 2023, 41 (16)
  • [5] Using whole-genome sequencing data to derive the homologous recombination deficiency scores
    Xavier M. de Luca
    Felicity Newell
    Stephen H. Kazakoff
    Gunter Hartel
    Amy E. McCart Reed
    Oliver Holmes
    Qinying Xu
    Scott Wood
    Conrad Leonard
    John V. Pearson
    Sunil R. Lakhani
    Nicola Waddell
    Katia Nones
    Peter T. Simpson
    [J]. npj Breast Cancer, 6
  • [6] Using whole-genome sequencing data to derive the homologous recombination deficiency scores
    de Luca, Xavier M.
    Newell, Felicity
    Kazakoff, Stephen H.
    Hartel, Gunter
    Reed, Amy E. McCart
    Holmes, Oliver
    Xu, Qinying
    Wood, Scott
    Leonard, Conrad
    Pearson, John, V
    Lakhani, Sunil R.
    Waddell, Nicola
    Nones, Katia
    Simpson, Peter T.
    [J]. NPJ BREAST CANCER, 2020, 6 (01)
  • [7] Whole-Genome Sequencing Reveals Breast Cancers with Mismatch Repair Deficiency
    Davies, Helen
    Morganella, Sandro
    Purdie, Colin A.
    Jang, Se Jin
    Borgen, Elin
    Russnes, Hege
    Glodzik, Dominik
    Zou, Xueqing
    Viari, Alain
    Richardson, Andrea L.
    Borresen-Dale, Anne-Lise
    Thompson, Alastair
    Eyfjord, Jorunn E.
    Kong, Gu
    Stratton, Michael R.
    Nik-Zainal, Serena
    [J]. CANCER RESEARCH, 2017, 77 (18) : 4755 - 4762
  • [8] A whole genome sequencing classifier of homologous recombination deficiency
    Hadi, Kevin
    Gundem, Gunes
    Levine, Max F.
    Deshpande, Aditya
    Patel, Minal
    Skzrypczak, Stan
    Al Assaad, Majd
    Mosquera, Juan Miguel
    Elemento, Olivier
    Kung, Andrew L.
    Medina-Martinez, Juan S.
    Papaemmanuil, Elli
    [J]. CANCER RESEARCH, 2023, 83 (07)
  • [9] Clinical utility of whole-genome sequencing in precision oncology
    Rosenquist, Richard
    Cuppen, Edwin
    Buettner, Reinhard
    Caldas, Carlos
    Dreau, Helene
    Elemento, Olivier
    Frederix, Geert
    Grimmond, Sean
    Haferlach, Torsten
    Jobanputra, Vaidehi
    Meggendorfer, Manja
    Mullighan, Charles G.
    Wordsworth, Sarah
    Schuh, Anna
    [J]. SEMINARS IN CANCER BIOLOGY, 2022, 84 : 32 - 39
  • [10] Accurately estimating the homologous recombination deficiency based on low-pass whole-genome sequencing and target sequencing.
    Lv, Fang
    Liu, Yiqian
    Zhang, Yaxi
    Liu, Xiaoli
    Pei Zhihua
    Yu, Jianing
    Chen, Weizhi
    He, Ji
    [J]. JOURNAL OF CLINICAL ONCOLOGY, 2021, 39 (15)
12345