Identification of haploid and diploid maize seeds using hybrid transformer model

被引:3
|
作者
Donmez, Emrah [1 ]
Kilicarslan, Serhat [1 ]
Kozkurt, Cemil [2 ]
Diker, Aykut [1 ]
Demir, Fahrettin Burak [1 ]
Elen, Abdullah [1 ]
机构
[1] Bandirma Onyedi Eylul Univ, Fac Engn & Nat Sci, Dept Software Engn, TR-10200 Bandirma, Balikesir, Turkiye
[2] Bandirma Onyedi Eylul Univ, Fac Engn & Nat Sci, Dept Transportat Engn, TR-10200 Bandirma, Balikesir, Turkiye
关键词
CNN; Deep learning; Haploid and diploid maize; ResMLP; Transformer; KERNELS;
D O I
10.1007/s00530-023-01174-y
中图分类号
TP [自动化技术、计算机技术];
学科分类号
0812 ;
摘要
Increasingly, more effective breeding techniques for new variations are preferred due to population growth and climatic change, particularly the accurate identification of the target variety. Maize haploid breeding technology, which can shorten the reproductive period and improve germplasm, has become the key to new maize breeding. In this study, a method in which deep features and image patches are analyzed together was proposed using a dataset consisting of 3000 different haploid/diploid type maize seed images in total. To achieve this objective, we adopted convolutional neural networks (CNNs) to recognize haploid and diploid maize seeds automatically through a transfer learning approach. More specifically, DenseNet201, ResNet152, ResNetRS50, RegNetX002, EfficientNetV2B0, EfficientB0, EfficientB1, EfficientB2, EfficientB3, EfficientB4, EfficientB5, EfficientB6, and EfficientB7 were applied for this specific task. The proposed hybrid model is inspired by both transfer learning and vision transformers. The error, accuracy, f1-score, recall, precision, and AUC of hybrid proposed model were 0.1491, 0.9633, and 0.9712, respectively. The accuracy rate reached, and the proposed model requires less processing in terms of complexity, which reveals the need for further investigation of such hybrid models. On the other hand, with the results obtained, it has been revealed that the maize seeds can be separated as haploid and diploid with traditional methods can be done much faster and without the need for an expert decision.
引用
收藏
页码:3833 / 3845
页数:13
相关论文
共 50 条
  • [1] Identification of haploid and diploid maize seeds using hybrid transformer model
    Emrah Dönmez
    Serhat Kılıçarslan
    Cemil Közkurt
    Aykut Diker
    Fahrettin Burak Demir
    Abdullah Elen
    [J]. Multimedia Systems, 2023, 29 (6) : 3833 - 3845
  • [2] Identification of haploid and diploid maize seeds using convolutional neural networks and a transfer learning approach
    Altuntas, Yahya
    Comert, Zafer
    Kocamaz, Adnan Fatih
    [J]. COMPUTERS AND ELECTRONICS IN AGRICULTURE, 2019, 163
  • [3] Discrimination of Haploid and Diploid Maize Seeds Based on Deep Features
    Donmez, Emrah
    [J]. 2020 28TH SIGNAL PROCESSING AND COMMUNICATIONS APPLICATIONS CONFERENCE (SIU), 2020,
  • [4] Improving the identification of haploid maize seeds using convolutional neural networks
    Sabadin, Felipe
    Galli, Giovanni
    Borsato, Ronaldo
    Gevartosky, Raysa
    Campos, Gabriela Romero
    Fritsche-Neto, Roberto
    [J]. CROP SCIENCE, 2021, 61 (04) : 2387 - 2397
  • [5] In Vivo Haploid Induction in Maize: Identification of Haploid Seeds by Their Oil Content
    Melchinger, Albrecht E.
    Schipprack, Wolfgang
    Utz, H. Friedrich
    Mirdita, Vilson
    [J]. CROP SCIENCE, 2014, 54 (04) : 1497 - 1504
  • [6] Classification of Haploid and Diploid Maize Seeds by Using Image Processing Techniques and Support Vector Machines
    Altuntas, Yahya
    Kocamaz, Adnan Fatih
    Cengiz, Rahime
    Esmeray, Mesut
    [J]. 2018 26TH SIGNAL PROCESSING AND COMMUNICATIONS APPLICATIONS CONFERENCE (SIU), 2018,
  • [7] Multiple deep learning by majority-vote to classify haploid and diploid maize seeds
    Donmez, Emrah
    Diker, Aykut
    Elen, Abdullah
    Ulu, Mesut
    [J]. SCIENTIA HORTICULTURAE, 2024, 337
  • [8] Discrimination of Maize Haploid Seeds from Hybrid Seeds Using Vis Spectroscopy and Support Vector Machine Method
    Liu Jin
    Guo Ting-ting
    Li Hao-chuan
    Jia Shi-qiang
    Yan Yan-lu
    An Dong
    Zhang Yao
    Chen Shao-jiang
    [J]. SPECTROSCOPY AND SPECTRAL ANALYSIS, 2015, 35 (11) : 3268 - 3274
  • [9] Haploid identification using tropicalized haploid inducer progenies in maize
    Ribeiro, Camila Bastos
    Pereira, Francielly de Cassia
    da Nobrega Filho, Lamartine
    Rezende, Breno Alvarenga
    das Gracas Dias, Kaio Olimpio
    Braz, Guilherme Tomaz
    Ruy, Murilo Candido
    Silva, Maria Beatriz
    Cenzi, Gisele
    Techio, Vania Helena
    de Souza, Joao Candido
    [J]. CROP BREEDING AND APPLIED BIOTECHNOLOGY, 2018, 18 (01): : 16 - 23
  • [10] Haploid identification in maize
    Dermail, Abil
    Mitchell, Mariah
    Foster, Tyler
    Fakude, Mercy
    Chen, Yu-Ru
    Suriharn, Khundej
    Frei, Ursula Karolina
    Lubberstedt, Thomas
    [J]. FRONTIERS IN PLANT SCIENCE, 2024, 15