Parvularcula maris sp. nov., an algicidal bacterium isolated from seawater

被引:0
|
作者
Li, Fei [1 ,2 ]
Tuo, Li [3 ]
Wang, Qiao-Zhen [1 ]
Yu, Lian [4 ]
Jiang, Fa-Jun [2 ]
Lai, Jun-Xiang [2 ,5 ]
Huang, Shu-Shi [1 ]
Qin, Xian- Ling [2 ]
机构
[1] Guangxi Acad Sci, Beibu Gulf Marine Res Ctr, Guangxi Key Lab Marine Nat Prod & Combinatorial Bi, Nanning 530007, Peoples R China
[2] Guangxi Acad Sci, Beibu Gulf Marine Res Ctr, Guangxi Key Lab Marine Environm Sci, Nanning 530007, Peoples R China
[3] Zunyi Med Univ, Life Sci Inst, Zunyi 563006, Peoples R China
[4] Guangxi Univ, Coll Light Ind & Food Engn, Nanning 530004, Guangxi, Peoples R China
[5] Beibu Gulf Marine Ind Res Inst, Fangchenggang 538000, Guangxi, Peoples R China
基金
中国国家自然科学基金;
关键词
algicidal bacterium; genome; Parvularcula; seawater; species; WEB SERVER; GEN; NOV; EXTRACTION; SEQUENCES; ALIGNMENT; TREES;
D O I
10.1099/ijsem.0.005825
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A taxonomic study was carried out on strain BGMRC 0090T, which was isolated from seawater. The isolate was a Gram-negative, aerobic, flagellated, rod-shaped bacterium with algicidal activity. Optimal growth was observed at 30 degrees C, pH 6.0 and with 2 % (w/v) NaCl. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain BGMRC 0090T belonged to the genus Parvularcula, with highest sequence similarity to Parvularcula lutaonensis CC-MMS-1T (98.4 %). Average nucleotide iden-tity, amino acid identity and digital DNA-DNA hybridization values between strain BGMRC 0090T and five strains of the genus Parvularcula with publicly available genomes were below 84.0, 69.2 and 21.4 %, respectively. The genome of strain BGMRC 0090T was 3.2 Mb with 64.8 mol% DNA G+C content and encoded 2905 predicted proteins, three rRNA, 42 tRNA and four ncRNA genes. Some algicidal biosynthesis-associated genes were detected in the genome. Strain BGMRC 0090T contained Q-10 as the major quinone. The predominant fatty acids were identified as summed feature 8 (C18 :1 omega 7c/omega 6c) and C16 : 0. Based on the polyphasic evidence presented in this paper, strain BGMRC 0090T is concluded to represent a novel species of the genus Parvularcula, for which the name Parvularcula maris sp. nov. is proposed. The type strain is BGMRC 0090T (= KCTC 92591T=MCCC 1K08100T).
引用
收藏
页数:8
相关论文
共 50 条
  • [1] Polyphasic Characterization of Lysobacter maris sp. nov., a Bacterium Isolated from Seawater
    Jaewoo Yoon
    [J]. Current Microbiology, 2016, 72 : 282 - 287
  • [2] Tenacibaculum xiamenense sp nov., an algicidal bacterium isolated from coastal seawater
    Li, Yi
    Wei, Jun
    Yang, Caiyun
    Lai, Qiliang
    Chen, Zhangran
    Li, Dong
    Zhang, Huajun
    Tian, Yun
    Zheng, Wei
    Zheng, Tianling
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2013, 63 : 3481 - 3486
  • [3] Altererythrobacter xiamenensis sp nov., an algicidal bacterium isolated from red tide seawater
    Lei, Xueqian
    Li, Yi
    Chen, Zhangran
    Zheng, Wei
    Lai, Qiliang
    Zhang, Huajun
    Guan, Chengwei
    Cai, Guanjing
    Yang, Xujun
    Tian, Yun
    Zheng, Tianling
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2014, 64 : 631 - 637
  • [4] Aquimarina salinaria sp. nov., a novel algicidal bacterium isolated from a saltpan
    Wen-Ming Chen
    Fu-Sian Sheu
    Shih-Yi Sheu
    [J]. Archives of Microbiology, 2012, 194 : 103 - 112
  • [5] Fibrivirga algicola gen. nov., sp. nov., an algicidal bacterium isolated from a freshwater river
    Sanghwa Park
    Ja Young Cho
    Dong-Hyun Jung
    Seok Won Jang
    Jung Hye Eom
    Seung Won Nam
    Dae Ryul Kwon
    Jaewon Ryu
    Keug Tae Kim
    [J]. Antonie van Leeuwenhoek, 2022, 115 : 899 - 909
  • [6] Fibrivirga algicola gen. nov., sp. nov., an algicidal bacterium isolated from a freshwater river
    Park, Sanghwa
    Cho, Ja Young
    Jung, Dong-Hyun
    Jang, Seok Won
    Eom, Jung Hye
    Nam, Seung Won
    Kwon, Dae Ryul
    Ryu, Jaewon
    Kim, Keug Tae
    [J]. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, 2022, 115 (07): : 899 - 909
  • [7] Characterization of Marinomonas algicida sp nov., a novel algicidal marine bacterium isolated from seawater
    Kristyanto, Sylvia
    Chaudhary, Dhiraj Kumar
    Lee, Sang-Seob
    Kim, Jaisoo
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2017, 67 (11) : 4777 - 4784
  • [8] Fulvivirga lutea sp. nov., a marine bacterium isolated from seawater
    Bae, Seung Seob
    Jung, Yoon-Hee
    Kwon, Yong Min
    Chung, Dawoon
    Choi, Grace
    Cho, Kichul
    Yu, Woon-Jong
    Baek, Kyunghwa
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2022, 72 (01)
  • [9] Croceicoccus ponticola sp. nov., a lipolytic bacterium isolated from seawater
    Park, Sooyeon
    Won, Sung-Min
    Oh, Tae-Kwang
    Yoon, Jung-Hoon
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2019, 69 (06) : 1551 - 1556
  • [10] Idiomarina maris sp nov., a marine bacterium isolated from sediment
    Zhang, Yan-Jiao
    Zhang, Xi-Ying
    Zhao, Hui-Lin
    Zhou, Ming-Yang
    Li, Hui-Juan
    Gao, Zhao-Ming
    Chen, Xiu-Lan
    Dang, Hong-Yue
    Zhang, Yu-Zhong
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2012, 62 : 370 - 375